Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cnot3Q8K0V4 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cnot3Q8K0V4 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cnot3Q8K0V4 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cnot3Q8K0V4 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cnot3Q8K0V4 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cnot3Q8K0V4 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cnot3Q8K0V4 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.91□□□□□ -0.66
Cnot3Q8K0V4 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cnot3Q8K0V4 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Cnot3Q8K0V4 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cnot3Q8K0V4 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cnot3Q8K0V4 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cnot3Q8K0V4 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cnot3Q8K0V4 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cnot3Q8K0V4 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cnot3Q8K0V4 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.91□□□□□ -0.66
Cnot3Q8K0V4 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cnot3Q8K0V4 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cnot3Q8K0V4 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cnot3Q8K0V4 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cnot3Q8K0V4 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.91□□□□□ -0.66
Cnot3Q8K0V4 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Gm12164-201ENSMUST00000121695 551 ntBASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Gm25261-201ENSMUST00000157416 134 ntBASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Gm25043-201ENSMUST00000158604 212 ntBASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Gm2546-201ENSMUST00000182630 991 ntBASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cnot3Q8K0V4 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Cnot3Q8K0V4 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.9□□□□□ -0.67
Cnot3Q8K0V4 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cnot3Q8K0V4 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Cnot3Q8K0V4 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cnot3Q8K0V4 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cnot3Q8K0V4 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cnot3Q8K0V4 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cnot3Q8K0V4 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cnot3Q8K0V4 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cnot3Q8K0V4 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Cnot3Q8K0V4 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cnot3Q8K0V4 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cnot3Q8K0V4 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Cnot3Q8K0V4 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cnot3Q8K0V4 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cnot3Q8K0V4 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cnot3Q8K0V4 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cnot3Q8K0V4 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cnot3Q8K0V4 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.89□□□□□ -0.67
Cnot3Q8K0V4 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cnot3Q8K0V4 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cnot3Q8K0V4 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cnot3Q8K0V4 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Cnot3Q8K0V4 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Cnot3Q8K0V4 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Cnot3Q8K0V4 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms