Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pdlim5Q8CI51 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Pdlim5Q8CI51 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pdlim5Q8CI51 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Pdlim5Q8CI51 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pdlim5Q8CI51 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.7
Pdlim5Q8CI51 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pdlim5Q8CI51 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pdlim5Q8CI51 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pdlim5Q8CI51 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pdlim5Q8CI51 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Pdlim5Q8CI51 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pdlim5Q8CI51 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Gm13996-201ENSMUST00000118456 430 ntBASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Gm25668-201ENSMUST00000157700 129 ntBASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Gm26361-201ENSMUST00000158868 186 ntBASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Gm25890-201ENSMUST00000177643 165 ntBASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Gm22614-201ENSMUST00000178300 165 ntBASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Gm27320-201ENSMUST00000184892 109 ntBASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Gm43179-201ENSMUST00000198797 275 ntBASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Gm45224-201ENSMUST00000208203 414 ntBASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Gm17827-201ENSMUST00000211825 742 ntBASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Gm18065-201ENSMUST00000221395 526 ntBASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Lect2-202ENSMUST00000225183 823 ntBASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Gm10254-201ENSMUST00000052888 867 ntBASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Gm22042-201ENSMUST00000082989 165 ntBASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Gm26110-201ENSMUST00000083971 165 ntBASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Pdlim5Q8CI51 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim5Q8CI51 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Pdlim5Q8CI51 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim5Q8CI51 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim5Q8CI51 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim5Q8CI51 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim5Q8CI51 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim5Q8CI51 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim5Q8CI51 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim5Q8CI51 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim5Q8CI51 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim5Q8CI51 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.69□□□□□ -0.7
Pdlim5Q8CI51 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim5Q8CI51 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim5Q8CI51 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.69□□□□□ -0.7
Pdlim5Q8CI51 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim5Q8CI51 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim5Q8CI51 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim5Q8CI51 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim5Q8CI51 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Pdlim5Q8CI51 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Pdlim5Q8CI51 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.69□□□□□ -0.7
Pdlim5Q8CI51 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms