Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.39□□□□□ -0.59
Rab43Q8CG50 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Gm14219-201ENSMUST00000120414 288 ntBASIC11.39□□□□□ -0.59
Rab43Q8CG50 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.39□□□□□ -0.59
Rab43Q8CG50 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Gm5982-201ENSMUST00000196234 512 ntBASIC11.39□□□□□ -0.59
Rab43Q8CG50 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Rab43Q8CG50 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.39□□□□□ -0.59
Rab43Q8CG50 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Gm4978-201ENSMUST00000071565 801 ntBASIC11.39□□□□□ -0.59
Rab43Q8CG50 Gm23105-201ENSMUST00000083719 134 ntBASIC11.39□□□□□ -0.59
Rab43Q8CG50 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab43Q8CG50 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.38□□□□□ -0.59
Rab43Q8CG50 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Gm25063-201ENSMUST00000104666 94 ntBASIC11.38□□□□□ -0.59
Rab43Q8CG50 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.38□□□□□ -0.59
Rab43Q8CG50 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.38□□□□□ -0.59
Rab43Q8CG50 Mir8093-201ENSMUST00000185043 137 ntBASIC11.38□□□□□ -0.59
Rab43Q8CG50 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.38□□□□□ -0.59
Rab43Q8CG50 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Gm45120-201ENSMUST00000208880 408 ntBASIC11.38□□□□□ -0.59
Rab43Q8CG50 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.38□□□□□ -0.59
Rab43Q8CG50 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab43Q8CG50 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab43Q8CG50 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab43Q8CG50 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rab43Q8CG50 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rab43Q8CG50 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab43Q8CG50 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab43Q8CG50 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab43Q8CG50 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.37□□□□□ -0.59
Rab43Q8CG50 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.37□□□□□ -0.59
Rab43Q8CG50 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab43Q8CG50 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab43Q8CG50 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab43Q8CG50 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms