Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Btrc-209ENSMUST00000224478 2194 ntBASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx1Q8C8B0 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Gm25076-201ENSMUST00000104098 132 ntBASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Gm16219-201ENSMUST00000120096 274 ntBASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Gm25492-201ENSMUST00000157383 129 ntBASIC13.54□□□□□ -0.24
Alx1Q8C8B0 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Gm44315-201ENSMUST00000203041 219 ntBASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Gm44980-201ENSMUST00000205826 314 ntBASIC13.54□□□□□ -0.24
Alx1Q8C8B0 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx1Q8C8B0 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Gm15528-201ENSMUST00000117821 864 ntBASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Gm21778-201ENSMUST00000178779 471 ntBASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Gm7467-201ENSMUST00000185173 652 ntBASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Gm3551-201ENSMUST00000190750 664 ntBASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC13.53□□□□□ -0.24
Alx1Q8C8B0 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.53□□□□□ -0.24
Alx1Q8C8B0 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Snora73b-201ENSMUST00000083419 205 ntBASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.53□□□□□ -0.24
Alx1Q8C8B0 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms