Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Gm38017-201ENSMUST00000194768 695 ntBASIC10.99□□□□□ -0.65
Ska3Q8C263 Gm37287-201ENSMUST00000195449 695 ntBASIC10.99□□□□□ -0.65
Ska3Q8C263 Gm37793-201ENSMUST00000195548 695 ntBASIC10.99□□□□□ -0.65
Ska3Q8C263 Gm26047-202ENSMUST00000198840 115 ntBASIC10.99□□□□□ -0.65
Ska3Q8C263 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ska3Q8C263 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.99□□□□□ -0.65
Ska3Q8C263 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Ska3Q8C263 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.99□□□□□ -0.65
Ska3Q8C263 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ska3Q8C263 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ska3Q8C263 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
Ska3Q8C263 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ska3Q8C263 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ska3Q8C263 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ska3Q8C263 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ska3Q8C263 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ska3Q8C263 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.99□□□□□ -0.65
Ska3Q8C263 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ska3Q8C263 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ska3Q8C263 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Ska3Q8C263 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.98□□□□□ -0.65
Ska3Q8C263 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.98□□□□□ -0.65
Ska3Q8C263 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.98□□□□□ -0.65
Ska3Q8C263 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.98□□□□□ -0.65
Ska3Q8C263 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.98□□□□□ -0.65
Ska3Q8C263 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Ska3Q8C263 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.98□□□□□ -0.65
Ska3Q8C263 Gm25732-201ENSMUST00000175168 60 ntBASIC10.98□□□□□ -0.65
Ska3Q8C263 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.98□□□□□ -0.65
Ska3Q8C263 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Ska3Q8C263 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.98□□□□□ -0.65
Ska3Q8C263 Gm5714-201ENSMUST00000197343 566 ntBASIC10.98□□□□□ -0.65
Ska3Q8C263 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.98□□□□□ -0.65
Ska3Q8C263 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.98□□□□□ -0.65
Ska3Q8C263 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
Ska3Q8C263 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Ska3Q8C263 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Ska3Q8C263 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Ska3Q8C263 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.98□□□□□ -0.65
Ska3Q8C263 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Ska3Q8C263 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Ska3Q8C263 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.98□□□□□ -0.65
Ska3Q8C263 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Ska3Q8C263 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ska3Q8C263 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.97□□□□□ -0.65
Ska3Q8C263 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska3Q8C263 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska3Q8C263 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska3Q8C263 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska3Q8C263 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ska3Q8C263 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska3Q8C263 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska3Q8C263 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska3Q8C263 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska3Q8C263 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska3Q8C263 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Ska3Q8C263 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska3Q8C263 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska3Q8C263 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska3Q8C263 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska3Q8C263 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Ska3Q8C263 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC10.97□□□□□ -0.65
Ska3Q8C263 Gm14058-201ENSMUST00000116082 735 ntBASIC10.97□□□□□ -0.65
Ska3Q8C263 Gm11960-201ENSMUST00000122068 925 ntBASIC10.97□□□□□ -0.65
Ska3Q8C263 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska3Q8C263 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.97□□□□□ -0.65
Ska3Q8C263 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska3Q8C263 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.97□□□□□ -0.65
Ska3Q8C263 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.97□□□□□ -0.65
Ska3Q8C263 Gm45575-201ENSMUST00000210283 548 ntBASIC10.97□□□□□ -0.65
Ska3Q8C263 Gm7848-201ENSMUST00000210739 718 ntBASIC10.97□□□□□ -0.65
Ska3Q8C263 Gm7940-201ENSMUST00000218195 769 ntBASIC10.97□□□□□ -0.65
Ska3Q8C263 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska3Q8C263 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms