Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Gm26047-202ENSMUST00000198840 115 ntBASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Gm14028-201ENSMUST00000117434 479 ntBASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Gm8199-201ENSMUST00000121323 823 ntBASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Gm3329-201ENSMUST00000159873 556 ntBASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Gm20495-201ENSMUST00000173902 235 ntBASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Gm27341-201ENSMUST00000183570 106 ntBASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Gm5733-201ENSMUST00000190232 939 ntBASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Gm4482-201ENSMUST00000200876 742 ntBASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Gm43966-201ENSMUST00000203301 612 ntBASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.98□□□□□ -0.49
Trub1Q8C0D0 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.98□□□□□ -0.49
Trub1Q8C0D0 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trub1Q8C0D0 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 124.1 ms