Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp1Q8BJQ2 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp1Q8BJQ2 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp1Q8BJQ2 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.44□□□□□ -0.42
Usp1Q8BJQ2 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp1Q8BJQ2 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp1Q8BJQ2 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Usp1Q8BJQ2 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Gm10731-201ENSMUST00000181171 448 ntBASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Gm8492-201ENSMUST00000182375 987 ntBASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Usp1Q8BJQ2 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Gm14942-201ENSMUST00000119642 336 ntBASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Gm7150-201ENSMUST00000122032 981 ntBASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Gm9136-201ENSMUST00000193368 454 ntBASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 CT025551.1-201ENSMUST00000223996 692 ntBASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp1Q8BJQ2 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Usp1Q8BJQ2 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp1Q8BJQ2 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Usp1Q8BJQ2 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp1Q8BJQ2 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp1Q8BJQ2 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp1Q8BJQ2 Map1b-203ENSMUST00000223725 2669 ntBASIC12.41□□□□□ -0.42
Usp1Q8BJQ2 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp1Q8BJQ2 Gm25076-201ENSMUST00000104098 132 ntBASIC12.41□□□□□ -0.42
Usp1Q8BJQ2 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Usp1Q8BJQ2 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp1Q8BJQ2 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.41□□□□□ -0.42
Usp1Q8BJQ2 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.41□□□□□ -0.42
Usp1Q8BJQ2 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.41□□□□□ -0.42
Usp1Q8BJQ2 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp1Q8BJQ2 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.41□□□□□ -0.42
Usp1Q8BJQ2 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.41□□□□□ -0.42
Usp1Q8BJQ2 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.41□□□□□ -0.42
Usp1Q8BJQ2 Gm28937-201ENSMUST00000185413 695 ntBASIC12.41□□□□□ -0.42
Usp1Q8BJQ2 Gm29400-201ENSMUST00000187208 695 ntBASIC12.41□□□□□ -0.42
Usp1Q8BJQ2 Gm28662-201ENSMUST00000188446 695 ntBASIC12.41□□□□□ -0.42
Usp1Q8BJQ2 Gm28251-201ENSMUST00000188835 695 ntBASIC12.41□□□□□ -0.42
Usp1Q8BJQ2 Gm37318-201ENSMUST00000194325 695 ntBASIC12.41□□□□□ -0.42
Usp1Q8BJQ2 Gm38017-201ENSMUST00000194768 695 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms