Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim62Q80V85 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim62Q80V85 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim62Q80V85 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim62Q80V85 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim62Q80V85 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim62Q80V85 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
Trim62Q80V85 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim62Q80V85 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.05□□□□□ -0.48
Trim62Q80V85 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim62Q80V85 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Trim62Q80V85 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim62Q80V85 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
Trim62Q80V85 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trim62Q80V85 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim62Q80V85 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim62Q80V85 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim62Q80V85 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim62Q80V85 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Trim62Q80V85 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim62Q80V85 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim62Q80V85 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim62Q80V85 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim62Q80V85 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim62Q80V85 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim62Q80V85 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim62Q80V85 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim62Q80V85 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim62Q80V85 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim62Q80V85 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim62Q80V85 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.05□□□□□ -0.48
Trim62Q80V85 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim62Q80V85 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Trim62Q80V85 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim62Q80V85 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim62Q80V85 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim62Q80V85 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim62Q80V85 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim62Q80V85 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim62Q80V85 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim62Q80V85 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim62Q80V85 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim62Q80V85 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim62Q80V85 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim62Q80V85 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim62Q80V85 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.04□□□□□ -0.48
Trim62Q80V85 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim62Q80V85 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim62Q80V85 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.04□□□□□ -0.48
Trim62Q80V85 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Trim62Q80V85 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim62Q80V85 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim62Q80V85 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim62Q80V85 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim62Q80V85 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.04□□□□□ -0.48
Trim62Q80V85 Gm12247-201ENSMUST00000117585 670 ntBASIC12.04□□□□□ -0.48
Trim62Q80V85 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trim62Q80V85 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim62Q80V85 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim62Q80V85 Gm18827-201ENSMUST00000188341 790 ntBASIC12.04□□□□□ -0.48
Trim62Q80V85 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.04□□□□□ -0.48
Trim62Q80V85 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.04□□□□□ -0.48
Trim62Q80V85 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim62Q80V85 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.04□□□□□ -0.48
Trim62Q80V85 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim62Q80V85 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trim62Q80V85 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim62Q80V85 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.04□□□□□ -0.48
Trim62Q80V85 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.04□□□□□ -0.48
Trim62Q80V85 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim62Q80V85 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim62Q80V85 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim62Q80V85 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim62Q80V85 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim62Q80V85 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim62Q80V85 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim62Q80V85 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim62Q80V85 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim62Q80V85 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trim62Q80V85 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim62Q80V85 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim62Q80V85 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim62Q80V85 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim62Q80V85 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim62Q80V85 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim62Q80V85 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trim62Q80V85 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim62Q80V85 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim62Q80V85 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim62Q80V85 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim62Q80V85 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trim62Q80V85 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim62Q80V85 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim62Q80V85 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.03□□□□□ -0.48
Trim62Q80V85 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim62Q80V85 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim62Q80V85 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim62Q80V85 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim62Q80V85 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim62Q80V85 Gm22711-201ENSMUST00000116890 133 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms