Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prdm4Q80V63 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Prdm4Q80V63 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Prdm4Q80V63 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Prdm4Q80V63 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.16□□□□□ -0.46
Prdm4Q80V63 Gm11439-201ENSMUST00000118598 409 ntBASIC12.16□□□□□ -0.46
Prdm4Q80V63 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.16□□□□□ -0.46
Prdm4Q80V63 Gm11964-201ENSMUST00000120982 444 ntBASIC12.16□□□□□ -0.46
Prdm4Q80V63 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.16□□□□□ -0.46
Prdm4Q80V63 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Prdm4Q80V63 Gm25261-201ENSMUST00000157416 134 ntBASIC12.16□□□□□ -0.46
Prdm4Q80V63 Gm8018-201ENSMUST00000173536 789 ntBASIC12.16□□□□□ -0.46
Prdm4Q80V63 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Prdm4Q80V63 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.16□□□□□ -0.46
Prdm4Q80V63 Gm18054-201ENSMUST00000207539 555 ntBASIC12.16□□□□□ -0.46
Prdm4Q80V63 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.16□□□□□ -0.46
Prdm4Q80V63 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.16□□□□□ -0.46
Prdm4Q80V63 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Prdm4Q80V63 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.16□□□□□ -0.46
Prdm4Q80V63 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prdm4Q80V63 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prdm4Q80V63 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Prdm4Q80V63 Traf1-207ENSMUST00000172159 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prdm4Q80V63 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prdm4Q80V63 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Prdm4Q80V63 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Prdm4Q80V63 Tnip1-205ENSMUST00000108886 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prdm4Q80V63 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Prdm4Q80V63 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC12.16□□□□□ -0.46
Prdm4Q80V63 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prdm4Q80V63 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Prdm4Q80V63 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prdm4Q80V63 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.16□□□□□ -0.46
Prdm4Q80V63 Cd247-206ENSMUST00000161971 2713 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Prdm4Q80V63 Ilf3-208ENSMUST00000214758 3177 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Prdm4Q80V63 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Prdm4Q80V63 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Prdm4Q80V63 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prdm4Q80V63 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Gm45336-201ENSMUST00000210010 3230 ntTSL 5 BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prdm4Q80V63 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prdm4Q80V63 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Gm3890-201ENSMUST00000182416 207 ntBASIC12.15□□□□□ -0.46
Prdm4Q80V63 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Prdm4Q80V63 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.15□□□□□ -0.46
Prdm4Q80V63 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Gm8420-201ENSMUST00000097103 598 ntBASIC12.15□□□□□ -0.46
Prdm4Q80V63 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Prdm4Q80V63 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.15□□□□□ -0.46
Prdm4Q80V63 Gm28138-201ENSMUST00000186250 2167 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Prdm4Q80V63 Gm29270-201ENSMUST00000188071 2167 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Prdm4Q80V63 Gm29392-201ENSMUST00000189429 2167 ntTSL 5 BASIC12.15□□□□□ -0.47
Prdm4Q80V63 Gm29252-201ENSMUST00000189869 2167 ntTSL 5 BASIC12.15□□□□□ -0.47
Prdm4Q80V63 Gm29305-201ENSMUST00000191054 2167 ntTSL 5 BASIC12.15□□□□□ -0.47
Prdm4Q80V63 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Prdm4Q80V63 Cog5-201ENSMUST00000036862 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Prdm4Q80V63 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Prdm4Q80V63 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC12.14□□□□□ -0.47
Prdm4Q80V63 Ralgps2-202ENSMUST00000063199 2947 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prdm4Q80V63 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Prdm4Q80V63 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Prdm4Q80V63 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prdm4Q80V63 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prdm4Q80V63 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prdm4Q80V63 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prdm4Q80V63 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC12.14□□□□□ -0.47
Prdm4Q80V63 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prdm4Q80V63 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prdm4Q80V63 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Prdm4Q80V63 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prdm4Q80V63 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Prdm4Q80V63 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prdm4Q80V63 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.14□□□□□ -0.47
Prdm4Q80V63 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms