Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm11246-201ENSMUST00000120880 345 ntBASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 Gm44551-201ENSMUST00000208804 171 ntBASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh8Q7TSK3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.52□□□□□ -0.56
Pcdh8Q7TSK3 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
Pcdh8Q7TSK3 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdh8Q7TSK3 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdh8Q7TSK3 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdh8Q7TSK3 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdh8Q7TSK3 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Pcdh8Q7TSK3 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Gm8731-201ENSMUST00000118088 412 ntBASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Gm15352-201ENSMUST00000118696 270 ntBASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh8Q7TSK3 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Gm22920-201ENSMUST00000102175 109 ntBASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Gm8737-201ENSMUST00000122208 642 ntBASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Gm9463-201ENSMUST00000206707 601 ntBASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pcdh8Q7TSK3 Gm8285-201ENSMUST00000208293 759 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms