Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 BC043934-202ENSMUST00000185694 2356 ntBASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdp1Q7TSG2 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Gm11531-201ENSMUST00000117614 555 ntBASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Gm11700-201ENSMUST00000119409 403 ntBASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.69□□□□□ -0.38
Ctdp1Q7TSG2 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms