Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chd4Q6PDQ2 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd4Q6PDQ2 Gm43610-201ENSMUST00000199117 365 ntBASIC14.94□□□□□ -0.02
Chd4Q6PDQ2 Gm35960-201ENSMUST00000202712 767 ntBASIC14.94□□□□□ -0.02
Chd4Q6PDQ2 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC14.94□□□□□ -0.02
Chd4Q6PDQ2 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd4Q6PDQ2 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.94□□□□□ -0.02
Chd4Q6PDQ2 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd4Q6PDQ2 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 Gm14592-201ENSMUST00000117201 560 ntBASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 Gm7255-201ENSMUST00000187371 908 ntBASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 AC022682.1-201ENSMUST00000224624 2023 ntBASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chd4Q6PDQ2 Gm18806-201ENSMUST00000207607 1775 ntBASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Gm11502-201ENSMUST00000120917 1211 ntBASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chd4Q6PDQ2 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Gm12712-201ENSMUST00000120676 801 ntBASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 AC154435.1-201ENSMUST00000223938 959 ntBASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chd4Q6PDQ2 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chd4Q6PDQ2 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chd4Q6PDQ2 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chd4Q6PDQ2 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chd4Q6PDQ2 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Chd4Q6PDQ2 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC14.9□□□□□ -0.02
Chd4Q6PDQ2 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms