Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm18935-201ENSMUST00000212692 664 ntBASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Gm7399-201ENSMUST00000032395 858 ntBASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Smarcd3Q6P9Z1 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Gm11511-201ENSMUST00000118146 540 ntBASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Gm38314-201ENSMUST00000195709 625 ntBASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Gm8956-201ENSMUST00000203939 825 ntBASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Gm45331-201ENSMUST00000209868 554 ntBASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd3Q6P9Z1 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Gm23270-201ENSMUST00000104055 131 ntBASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Gm11439-201ENSMUST00000118598 409 ntBASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Gm6963-201ENSMUST00000147879 379 ntBASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Gm5070-201ENSMUST00000177599 862 ntBASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Gm31256-201ENSMUST00000194705 506 ntBASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Gm4607-201ENSMUST00000206649 577 ntBASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms