Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC8.88□□□□□ -0.99
NipblQ6KCD5 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC8.87□□□□□ -0.99
NipblQ6KCD5 Gm11736-201ENSMUST00000121468 505 ntBASIC8.87□□□□□ -0.99
NipblQ6KCD5 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Gm26047-201ENSMUST00000157308 113 ntBASIC8.87□□□□□ -0.99
NipblQ6KCD5 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC8.87□□□□□ -0.99
NipblQ6KCD5 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Gm26047-202ENSMUST00000198840 115 ntBASIC8.87□□□□□ -0.99
NipblQ6KCD5 Gm17825-201ENSMUST00000206836 794 ntBASIC8.87□□□□□ -0.99
NipblQ6KCD5 CT573047.1-201ENSMUST00000223652 851 ntBASIC8.87□□□□□ -0.99
NipblQ6KCD5 Krtap6-3-201ENSMUST00000079151 444 ntBASIC8.87□□□□□ -0.99
NipblQ6KCD5 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC8.87□□□□□ -0.99
NipblQ6KCD5 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Gm8152-201ENSMUST00000120842 637 ntBASIC8.87□□□□□ -0.99
NipblQ6KCD5 Gm14829-201ENSMUST00000121499 1138 ntBASIC8.87□□□□□ -0.99
NipblQ6KCD5 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Gm19015-201ENSMUST00000184002 1189 ntBASIC8.87□□□□□ -0.99
NipblQ6KCD5 Gm28833-201ENSMUST00000189671 559 ntBASIC8.87□□□□□ -0.99
NipblQ6KCD5 Gm43249-201ENSMUST00000200464 458 ntBASIC8.87□□□□□ -0.99
NipblQ6KCD5 Gm6423-201ENSMUST00000204315 934 ntBASIC8.87□□□□□ -0.99
NipblQ6KCD5 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
NipblQ6KCD5 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Gm13117-201ENSMUST00000120894 691 ntBASIC8.86□□□□□ -0.99
NipblQ6KCD5 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC8.86□□□□□ -0.99
NipblQ6KCD5 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC8.86□□□□□ -0.99
NipblQ6KCD5 AC153152.3-201ENSMUST00000222188 1135 ntBASIC8.86□□□□□ -0.99
NipblQ6KCD5 AC164618.2-201ENSMUST00000224770 573 ntBASIC8.86□□□□□ -0.99
NipblQ6KCD5 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Gm44292-201ENSMUST00000205194 2364 ntBASIC8.86□□□□□ -0.99
NipblQ6KCD5 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
NipblQ6KCD5 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
NipblQ6KCD5 AC116503.1-201ENSMUST00000215445 2192 ntBASIC8.86□□□□□ -0.99
NipblQ6KCD5 Gm16418-201ENSMUST00000118577 171 ntBASIC8.86□□□□□ -0.99
NipblQ6KCD5 Gm15610-201ENSMUST00000120584 195 ntBASIC8.86□□□□□ -0.99
NipblQ6KCD5 Gm24294-201ENSMUST00000158295 277 ntBASIC8.86□□□□□ -0.99
NipblQ6KCD5 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
NipblQ6KCD5 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Gm42821-201ENSMUST00000199771 489 ntBASIC8.86□□□□□ -0.99
NipblQ6KCD5 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
NipblQ6KCD5 Gm23105-201ENSMUST00000083719 134 ntBASIC8.86□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms