Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm33707-201ENSMUST00000195135 569 ntBASIC13.49□□□□□ -0.25
Scn9aQ62205 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn9aQ62205 Gm6518-201ENSMUST00000208450 342 ntBASIC13.49□□□□□ -0.25
Scn9aQ62205 Gm18001-201ENSMUST00000212023 688 ntBASIC13.49□□□□□ -0.25
Scn9aQ62205 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn9aQ62205 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn9aQ62205 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn9aQ62205 Gm45416-201ENSMUST00000209713 2201 ntBASIC13.49□□□□□ -0.25
Scn9aQ62205 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn9aQ62205 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Scn9aQ62205 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn9aQ62205 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn9aQ62205 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn9aQ62205 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn9aQ62205 AC154354.1-203ENSMUST00000225565 1364 ntBASIC13.49□□□□□ -0.25
Scn9aQ62205 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn9aQ62205 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn9aQ62205 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Scn9aQ62205 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC13.49□□□□□ -0.25
Scn9aQ62205 Gm27440-201ENSMUST00000184785 107 ntBASIC13.49□□□□□ -0.25
Scn9aQ62205 Gm29164-201ENSMUST00000185454 1024 ntBASIC13.49□□□□□ -0.25
Scn9aQ62205 Gm42751-201ENSMUST00000198065 559 ntBASIC13.49□□□□□ -0.25
Scn9aQ62205 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC13.49□□□□□ -0.25
Scn9aQ62205 AC121357.1-201ENSMUST00000227365 608 ntBASIC13.49□□□□□ -0.25
Scn9aQ62205 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Scn9aQ62205 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Scn9aQ62205 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn9aQ62205 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn9aQ62205 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.48□□□□□ -0.25
Scn9aQ62205 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn9aQ62205 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn9aQ62205 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn9aQ62205 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn9aQ62205 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn9aQ62205 Gm9915-201ENSMUST00000066196 1383 ntBASIC13.48□□□□□ -0.25
Scn9aQ62205 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Scn9aQ62205 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn9aQ62205 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Scn9aQ62205 Gm24294-201ENSMUST00000158295 277 ntBASIC13.48□□□□□ -0.25
Scn9aQ62205 Gm4462-201ENSMUST00000166453 492 ntBASIC13.48□□□□□ -0.25
Scn9aQ62205 Gm27826-201ENSMUST00000175282 255 ntBASIC13.48□□□□□ -0.25
Scn9aQ62205 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.48□□□□□ -0.25
Scn9aQ62205 Gm43244-201ENSMUST00000196994 1285 ntBASIC13.48□□□□□ -0.25
Scn9aQ62205 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC13.48□□□□□ -0.25
Scn9aQ62205 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC13.48□□□□□ -0.25
Scn9aQ62205 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn9aQ62205 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn9aQ62205 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn9aQ62205 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn9aQ62205 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn9aQ62205 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn9aQ62205 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn9aQ62205 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn9aQ62205 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC13.48□□□□□ -0.25
Scn9aQ62205 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC13.48□□□□□ -0.25
Scn9aQ62205 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC13.47□□□□□ -0.25
Scn9aQ62205 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn9aQ62205 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn9aQ62205 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Scn9aQ62205 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Scn9aQ62205 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.47□□□□□ -0.25
Scn9aQ62205 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Scn9aQ62205 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn9aQ62205 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn9aQ62205 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Scn9aQ62205 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC13.47□□□□□ -0.25
Scn9aQ62205 Gm20493-201ENSMUST00000173706 213 ntBASIC13.47□□□□□ -0.25
Scn9aQ62205 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Scn9aQ62205 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Scn9aQ62205 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn9aQ62205 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn9aQ62205 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn9aQ62205 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn9aQ62205 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn9aQ62205 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn9aQ62205 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn9aQ62205 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn9aQ62205 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.47□□□□□ -0.25
Scn9aQ62205 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn9aQ62205 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Scn9aQ62205 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.47□□□□□ -0.25
Scn9aQ62205 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn9aQ62205 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn9aQ62205 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.47□□□□□ -0.25
Scn9aQ62205 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn9aQ62205 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC13.47□□□□□ -0.25
Scn9aQ62205 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn9aQ62205 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC13.47□□□□□ -0.25
Scn9aQ62205 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn9aQ62205 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Scn9aQ62205 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn9aQ62205 Mir6359-201ENSMUST00000183668 81 ntBASIC13.47□□□□□ -0.25
Scn9aQ62205 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC13.47□□□□□ -0.25
Scn9aQ62205 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn9aQ62205 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Scn9aQ62205 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn9aQ62205 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn9aQ62205 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn9aQ62205 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn9aQ62205 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms