Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm37318-201ENSMUST00000194325 695 ntBASIC12.85□□□□□ -0.35
Ift88Q61371 Gm38017-201ENSMUST00000194768 695 ntBASIC12.85□□□□□ -0.35
Ift88Q61371 Gm37287-201ENSMUST00000195449 695 ntBASIC12.85□□□□□ -0.35
Ift88Q61371 Gm37793-201ENSMUST00000195548 695 ntBASIC12.85□□□□□ -0.35
Ift88Q61371 Rprl1-202ENSMUST00000198476 238 ntBASIC12.85□□□□□ -0.35
Ift88Q61371 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.85□□□□□ -0.35
Ift88Q61371 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.85□□□□□ -0.35
Ift88Q61371 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift88Q61371 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift88Q61371 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ift88Q61371 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ift88Q61371 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift88Q61371 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift88Q61371 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ift88Q61371 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ift88Q61371 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift88Q61371 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ift88Q61371 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ift88Q61371 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift88Q61371 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.85□□□□□ -0.35
Ift88Q61371 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift88Q61371 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift88Q61371 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Ift88Q61371 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.84□□□□□ -0.35
Ift88Q61371 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.84□□□□□ -0.35
Ift88Q61371 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.84□□□□□ -0.35
Ift88Q61371 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.84□□□□□ -0.35
Ift88Q61371 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.84□□□□□ -0.35
Ift88Q61371 Gm6450-201ENSMUST00000200896 574 ntBASIC12.84□□□□□ -0.35
Ift88Q61371 Gm21769-201ENSMUST00000211922 111 ntBASIC12.84□□□□□ -0.35
Ift88Q61371 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.84□□□□□ -0.35
Ift88Q61371 Gm9368-201ENSMUST00000219348 831 ntBASIC12.84□□□□□ -0.35
Ift88Q61371 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ift88Q61371 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.84□□□□□ -0.35
Ift88Q61371 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.84□□□□□ -0.35
Ift88Q61371 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.84□□□□□ -0.35
Ift88Q61371 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ift88Q61371 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ift88Q61371 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.83□□□□□ -0.35
Ift88Q61371 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ift88Q61371 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ift88Q61371 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ift88Q61371 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ift88Q61371 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Ift88Q61371 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ift88Q61371 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ift88Q61371 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ift88Q61371 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ift88Q61371 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ift88Q61371 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ift88Q61371 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ift88Q61371 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ift88Q61371 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ift88Q61371 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ift88Q61371 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.83□□□□□ -0.36
Ift88Q61371 AY702102-202ENSMUST00000194651 1173 ntBASIC12.83□□□□□ -0.36
Ift88Q61371 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.83□□□□□ -0.36
Ift88Q61371 Gm43966-201ENSMUST00000203301 612 ntBASIC12.83□□□□□ -0.36
Ift88Q61371 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.83□□□□□ -0.36
Ift88Q61371 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ift88Q61371 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ift88Q61371 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ift88Q61371 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ift88Q61371 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ift88Q61371 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ift88Q61371 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.83□□□□□ -0.36
Ift88Q61371 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Ift88Q61371 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Ift88Q61371 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ift88Q61371 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms