Protein–RNA interactions for Protein: Q61361

Bcan, Brevican core protein, mousemouse

Predictions only

Length 883 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BcanQ61361 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
BcanQ61361 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
BcanQ61361 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
BcanQ61361 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
BcanQ61361 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BcanQ61361 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BcanQ61361 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
BcanQ61361 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BcanQ61361 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC14.38□□□□□ -0.11
BcanQ61361 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
BcanQ61361 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
BcanQ61361 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BcanQ61361 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
BcanQ61361 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
BcanQ61361 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BcanQ61361 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BcanQ61361 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BcanQ61361 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
BcanQ61361 Gm23272-201ENSMUST00000104053 129 ntBASIC14.37□□□□□ -0.11
BcanQ61361 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC14.37□□□□□ -0.11
BcanQ61361 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC14.37□□□□□ -0.11
BcanQ61361 Gm11244-201ENSMUST00000121243 237 ntBASIC14.37□□□□□ -0.11
BcanQ61361 Gm11675-201ENSMUST00000121873 832 ntBASIC14.37□□□□□ -0.11
BcanQ61361 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BcanQ61361 Gm22119-201ENSMUST00000175594 99 ntBASIC14.37□□□□□ -0.11
BcanQ61361 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BcanQ61361 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BcanQ61361 Gm8531-201ENSMUST00000188319 893 ntBASIC14.37□□□□□ -0.11
BcanQ61361 Gm42518-201ENSMUST00000196277 938 ntBASIC14.37□□□□□ -0.11
BcanQ61361 Gm3793-201ENSMUST00000204973 672 ntBASIC14.37□□□□□ -0.11
BcanQ61361 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
BcanQ61361 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC14.37□□□□□ -0.11
BcanQ61361 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BcanQ61361 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BcanQ61361 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BcanQ61361 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC14.37□□□□□ -0.11
BcanQ61361 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BcanQ61361 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.37□□□□□ -0.11
BcanQ61361 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC14.37□□□□□ -0.11
BcanQ61361 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BcanQ61361 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BcanQ61361 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BcanQ61361 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.37□□□□□ -0.11
BcanQ61361 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BcanQ61361 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
BcanQ61361 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BcanQ61361 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
BcanQ61361 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BcanQ61361 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BcanQ61361 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
BcanQ61361 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BcanQ61361 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BcanQ61361 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.36□□□□□ -0.11
BcanQ61361 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
BcanQ61361 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BcanQ61361 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BcanQ61361 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
BcanQ61361 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC14.36□□□□□ -0.11
BcanQ61361 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
BcanQ61361 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BcanQ61361 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BcanQ61361 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BcanQ61361 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
BcanQ61361 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC14.36□□□□□ -0.11
BcanQ61361 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC14.36□□□□□ -0.11
BcanQ61361 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BcanQ61361 Gm15615-201ENSMUST00000118876 198 ntBASIC14.36□□□□□ -0.11
BcanQ61361 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BcanQ61361 Gm6548-201ENSMUST00000167498 1165 ntBASIC14.36□□□□□ -0.11
BcanQ61361 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC14.36□□□□□ -0.11
BcanQ61361 Mir8093-201ENSMUST00000185043 137 ntBASIC14.36□□□□□ -0.11
BcanQ61361 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC14.36□□□□□ -0.11
BcanQ61361 Gm37826-201ENSMUST00000195329 322 ntBASIC14.36□□□□□ -0.11
BcanQ61361 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC14.36□□□□□ -0.11
BcanQ61361 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BcanQ61361 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC14.36□□□□□ -0.11
BcanQ61361 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC14.36□□□□□ -0.11
BcanQ61361 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.36□□□□□ -0.11
BcanQ61361 Gm4978-201ENSMUST00000071565 801 ntBASIC14.36□□□□□ -0.11
BcanQ61361 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
BcanQ61361 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BcanQ61361 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
BcanQ61361 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
BcanQ61361 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
BcanQ61361 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BcanQ61361 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.36□□□□□ -0.11
BcanQ61361 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
BcanQ61361 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BcanQ61361 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BcanQ61361 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BcanQ61361 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
BcanQ61361 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BcanQ61361 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BcanQ61361 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.36□□□□□ -0.11
BcanQ61361 Gm21358-201ENSMUST00000191645 1659 ntBASIC14.36□□□□□ -0.11
BcanQ61361 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BcanQ61361 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BcanQ61361 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
BcanQ61361 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
BcanQ61361 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms