Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm19287-201ENSMUST00000203190 358 ntBASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.39□□□□□ -0.43
Syne3Q4FZC9 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Gm26448-201ENSMUST00000082446 203 ntBASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Gm12266-201ENSMUST00000120311 962 ntBASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Gm8343-201ENSMUST00000182705 994 ntBASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Gm27341-201ENSMUST00000183570 106 ntBASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Gm37666-201ENSMUST00000194110 866 ntBASIC12.38□□□□□ -0.43
Syne3Q4FZC9 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Gm19208-201ENSMUST00000213861 912 ntBASIC12.38□□□□□ -0.43
Syne3Q4FZC9 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Gm270-201ENSMUST00000223010 976 ntBASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Gm5705-201ENSMUST00000066241 711 ntBASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Syne3Q4FZC9 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Gm12380-201ENSMUST00000119012 544 ntBASIC12.37□□□□□ -0.43
Syne3Q4FZC9 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Syne3Q4FZC9 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Syne3Q4FZC9 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Syne3Q4FZC9 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Syne3Q4FZC9 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Syne3Q4FZC9 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Syne3Q4FZC9 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms