Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Gm22920-201ENSMUST00000102175 109 ntBASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Mir3102-201ENSMUST00000175555 104 ntBASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Gm18367-201ENSMUST00000176139 600 ntBASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Gm18065-201ENSMUST00000221395 526 ntBASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nlrc4Q3UP24 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nlrc4Q3UP24 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nlrc4Q3UP24 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nlrc4Q3UP24 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nlrc4Q3UP24 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.27□□□□□ -0.44
Nlrc4Q3UP24 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nlrc4Q3UP24 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Nlrc4Q3UP24 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nlrc4Q3UP24 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nlrc4Q3UP24 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nlrc4Q3UP24 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nlrc4Q3UP24 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nlrc4Q3UP24 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
Nlrc4Q3UP24 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nlrc4Q3UP24 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Nlrc4Q3UP24 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Nlrc4Q3UP24 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Gm14071-201ENSMUST00000117817 509 ntBASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Gm22144-201ENSMUST00000157402 102 ntBASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Gm20495-201ENSMUST00000173902 235 ntBASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Gm12407-201ENSMUST00000180219 324 ntBASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Mir6546-201ENSMUST00000184460 62 ntBASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Gm6108-201ENSMUST00000208365 367 ntBASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nlrc4Q3UP24 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nlrc4Q3UP24 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms