Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.59□□□□□ -0.39
Snx27Q3UHD6 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Snx27Q3UHD6 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Snx27Q3UHD6 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snx27Q3UHD6 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snx27Q3UHD6 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Snx27Q3UHD6 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snx27Q3UHD6 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Snx27Q3UHD6 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Snx27Q3UHD6 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snx27Q3UHD6 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Snx27Q3UHD6 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snx27Q3UHD6 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Snx27Q3UHD6 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Snx27Q3UHD6 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Snx27Q3UHD6 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Snx27Q3UHD6 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Snx27Q3UHD6 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Snx27Q3UHD6 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Snx27Q3UHD6 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Gm4294-201ENSMUST00000105169 614 ntBASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Gm15329-201ENSMUST00000121408 155 ntBASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Gm13182-201ENSMUST00000122241 312 ntBASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Mir1901-201ENSMUST00000122616 78 ntBASIC12.58□□□□□ -0.4
Snx27Q3UHD6 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Mir6998-201ENSMUST00000183343 64 ntBASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Gm44158-201ENSMUST00000203881 505 ntBASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.58□□□□□ -0.4
Snx27Q3UHD6 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snx27Q3UHD6 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Gm37826-201ENSMUST00000195329 322 ntBASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Snx27Q3UHD6 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms