Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Brf2Q3UAW9 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Brf2Q3UAW9 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Brf2Q3UAW9 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Gm15207-201ENSMUST00000119259 442 ntBASIC10.97□□□□□ -0.65
Brf2Q3UAW9 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Gm26047-201ENSMUST00000157308 113 ntBASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Gm24749-201ENSMUST00000157838 343 ntBASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Gm4310-201ENSMUST00000177847 889 ntBASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Gm28686-201ENSMUST00000187404 609 ntBASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Gm26047-202ENSMUST00000198840 115 ntBASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Gm18065-201ENSMUST00000221395 526 ntBASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Gm807-202ENSMUST00000224929 408 ntBASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Lect2-202ENSMUST00000225183 823 ntBASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Brf2Q3UAW9 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.96□□□□□ -0.65
Brf2Q3UAW9 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Brf2Q3UAW9 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms