Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm14856-201ENSMUST00000121548 613 ntBASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Defa-ps10-201ENSMUST00000121649 171 ntBASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm26046-201ENSMUST00000157312 166 ntBASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm25687-201ENSMUST00000175442 241 ntBASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm6677-201ENSMUST00000195100 441 ntBASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm44547-201ENSMUST00000207793 1446 ntBASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Rab7b-201ENSMUST00000064664 1672 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm18986-201ENSMUST00000216029 1986 ntBASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm6686-201ENSMUST00000178455 258 ntBASIC5.93□□□□□ -1.46
Ush2AQ2QI47 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Pdlim5-209ENSMUST00000196908 1196 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm18538-201ENSMUST00000204265 484 ntBASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm45620-201ENSMUST00000209980 468 ntTSL 3 BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 A1cf-204ENSMUST00000224564 1432 ntBASIC5.93□□□□□ -1.46
Ush2AQ2QI47 AC151895.1-201ENSMUST00000219025 1742 ntBASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Pdcd1lg2-201ENSMUST00000112576 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm5739-201ENSMUST00000208601 1703 ntBASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm5171-201ENSMUST00000214944 1415 ntBASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm23368-201ENSMUST00000116939 96 ntBASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm14225-201ENSMUST00000142310 539 ntTSL 2 BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm26810-201ENSMUST00000181153 1106 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm28179-201ENSMUST00000188365 613 ntBASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Tpi-rs11-201ENSMUST00000202145 310 ntBASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm45925-202ENSMUST00000219904 1136 ntBASIC5.93□□□□□ -1.46
Ush2AQ2QI47 n-R5s5-201ENSMUST00000083134 119 ntBASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Iqcf5-201ENSMUST00000085113 551 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Gm18901-201ENSMUST00000197840 1444 ntBASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 CT025624.1-201ENSMUST00000224007 2700 ntBASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Phyhd1-203ENSMUST00000113643 1195 ntTSL 5 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Gm19246-201ENSMUST00000173599 255 ntBASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Mir7029-201ENSMUST00000184777 61 ntBASIC5.92□□□□□ -1.46
Ush2AQ2QI47 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Gm7384-201ENSMUST00000203682 530 ntBASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Gm46189-201ENSMUST00000219395 644 ntTSL 3 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 AC154186.1-201ENSMUST00000227711 1597 ntBASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Bdh2-202ENSMUST00000120397 1172 ntTSL 5 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Gm4252-201ENSMUST00000174823 313 ntBASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Cnih4-205ENSMUST00000193907 531 ntTSL 2 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 AC165260.2-202ENSMUST00000224998 631 ntBASIC5.92□□□□□ -1.46
Ush2AQ2QI47 AC118704.1-201ENSMUST00000225022 695 ntBASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Rpl6-201ENSMUST00000031617 1270 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Gm10339-202ENSMUST00000181509 1691 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Gm10251-202ENSMUST00000181786 1688 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms