Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col19a1Q0VF58 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC12.4□□□□□ -0.42
Col19a1Q0VF58 Snord23-201ENSMUST00000116828 109 ntBASIC12.4□□□□□ -0.42
Col19a1Q0VF58 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col19a1Q0VF58 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Col19a1Q0VF58 Gm15746-201ENSMUST00000120684 1027 ntBASIC12.4□□□□□ -0.42
Col19a1Q0VF58 Gm13284-201ENSMUST00000121020 547 ntBASIC12.4□□□□□ -0.42
Col19a1Q0VF58 Gm14441-201ENSMUST00000121960 540 ntBASIC12.4□□□□□ -0.42
Col19a1Q0VF58 Gm7211-201ENSMUST00000172692 1118 ntBASIC12.4□□□□□ -0.42
Col19a1Q0VF58 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Col19a1Q0VF58 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col19a1Q0VF58 Gm20781-201ENSMUST00000193154 693 ntBASIC12.4□□□□□ -0.42
Col19a1Q0VF58 Gm21736-201ENSMUST00000195399 693 ntBASIC12.4□□□□□ -0.42
Col19a1Q0VF58 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Col19a1Q0VF58 Gm6518-201ENSMUST00000208450 342 ntBASIC12.4□□□□□ -0.42
Col19a1Q0VF58 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC12.4□□□□□ -0.42
Col19a1Q0VF58 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC12.4□□□□□ -0.42
Col19a1Q0VF58 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col19a1Q0VF58 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col19a1Q0VF58 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.4□□□□□ -0.42
Col19a1Q0VF58 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col19a1Q0VF58 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col19a1Q0VF58 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC12.4□□□□□ -0.42
Col19a1Q0VF58 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Col19a1Q0VF58 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col19a1Q0VF58 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col19a1Q0VF58 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col19a1Q0VF58 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Col19a1Q0VF58 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col19a1Q0VF58 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Gm1826-201ENSMUST00000118646 1162 ntBASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Gm7572-201ENSMUST00000182616 766 ntBASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.39□□□□□ -0.43
Col19a1Q0VF58 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Gm25580-201ENSMUST00000083409 327 ntBASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col19a1Q0VF58 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC12.38□□□□□ -0.43
Col19a1Q0VF58 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col19a1Q0VF58 Cog3-203ENSMUST00000227473 4197 ntBASIC12.38□□□□□ -0.43
Col19a1Q0VF58 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col19a1Q0VF58 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Col19a1Q0VF58 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col19a1Q0VF58 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col19a1Q0VF58 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col19a1Q0VF58 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col19a1Q0VF58 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Col19a1Q0VF58 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Col19a1Q0VF58 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col19a1Q0VF58 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col19a1Q0VF58 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col19a1Q0VF58 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col19a1Q0VF58 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col19a1Q0VF58 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.38□□□□□ -0.43
Col19a1Q0VF58 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC12.38□□□□□ -0.43
Col19a1Q0VF58 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC12.38□□□□□ -0.43
Col19a1Q0VF58 Gm26174-201ENSMUST00000158415 219 ntBASIC12.38□□□□□ -0.43
Col19a1Q0VF58 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
Col19a1Q0VF58 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC12.38□□□□□ -0.43
Col19a1Q0VF58 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC12.38□□□□□ -0.43
Col19a1Q0VF58 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.38□□□□□ -0.43
Col19a1Q0VF58 Gm43726-201ENSMUST00000199110 775 ntBASIC12.38□□□□□ -0.43
Col19a1Q0VF58 Id2-203ENSMUST00000222667 958 ntBASIC12.38□□□□□ -0.43
Col19a1Q0VF58 AC158986.2-201ENSMUST00000227487 618 ntBASIC12.38□□□□□ -0.43
Col19a1Q0VF58 AC122035.1-201ENSMUST00000227576 1016 ntBASIC12.38□□□□□ -0.43
Col19a1Q0VF58 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms