Protein–RNA interactions for Protein: Q0P5V2

Sobp, Sine oculis-binding protein homolog, mousemouse

Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SobpQ0P5V2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.24□□□□□ -0.29
SobpQ0P5V2 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Gm24992-201ENSMUST00000157412 130 ntBASIC13.24□□□□□ -0.29
SobpQ0P5V2 Gm6946-201ENSMUST00000182237 987 ntBASIC13.24□□□□□ -0.29
SobpQ0P5V2 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC13.24□□□□□ -0.29
SobpQ0P5V2 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Gm8730-201ENSMUST00000076373 954 ntBASIC13.24□□□□□ -0.29
SobpQ0P5V2 Gm23458-201ENSMUST00000083257 169 ntBASIC13.24□□□□□ -0.29
SobpQ0P5V2 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SobpQ0P5V2 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SobpQ0P5V2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SobpQ0P5V2 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC13.23□□□□□ -0.29
SobpQ0P5V2 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC13.23□□□□□ -0.29
SobpQ0P5V2 Gm13777-201ENSMUST00000118208 345 ntBASIC13.23□□□□□ -0.29
SobpQ0P5V2 Gm6939-201ENSMUST00000122029 864 ntBASIC13.23□□□□□ -0.29
SobpQ0P5V2 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC13.23□□□□□ -0.29
SobpQ0P5V2 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Gm8601-201ENSMUST00000182096 909 ntBASIC13.23□□□□□ -0.29
SobpQ0P5V2 Gm27316-201ENSMUST00000184884 277 ntBASIC13.23□□□□□ -0.29
SobpQ0P5V2 Gm43460-201ENSMUST00000202491 1057 ntBASIC13.23□□□□□ -0.29
SobpQ0P5V2 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC13.23□□□□□ -0.29
SobpQ0P5V2 AC192333.3-201ENSMUST00000224041 463 ntBASIC13.23□□□□□ -0.29
SobpQ0P5V2 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SobpQ0P5V2 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Gm6560-201ENSMUST00000198588 1591 ntBASIC13.23□□□□□ -0.29
SobpQ0P5V2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.23□□□□□ -0.29
SobpQ0P5V2 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SobpQ0P5V2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SobpQ0P5V2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SobpQ0P5V2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SobpQ0P5V2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SobpQ0P5V2 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SobpQ0P5V2 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SobpQ0P5V2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SobpQ0P5V2 Gm5159-201ENSMUST00000212733 1652 ntBASIC13.22□□□□□ -0.29
SobpQ0P5V2 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SobpQ0P5V2 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SobpQ0P5V2 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SobpQ0P5V2 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SobpQ0P5V2 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SobpQ0P5V2 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SobpQ0P5V2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SobpQ0P5V2 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms