Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox9Q04887 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox9Q04887 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox9Q04887 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox9Q04887 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox9Q04887 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Sox9Q04887 Gm13039-201ENSMUST00000118638 794 ntBASIC12.07□□□□□ -0.48
Sox9Q04887 Gm14395-201ENSMUST00000120494 563 ntBASIC12.07□□□□□ -0.48
Sox9Q04887 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox9Q04887 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC12.07□□□□□ -0.48
Sox9Q04887 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC12.07□□□□□ -0.48
Sox9Q04887 Gm27956-201ENSMUST00000175604 260 ntBASIC12.07□□□□□ -0.48
Sox9Q04887 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox9Q04887 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC12.07□□□□□ -0.48
Sox9Q04887 Gm6331-201ENSMUST00000217890 450 ntBASIC12.07□□□□□ -0.48
Sox9Q04887 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Sox9Q04887 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox9Q04887 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox9Q04887 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox9Q04887 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox9Q04887 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.07□□□□□ -0.48
Sox9Q04887 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox9Q04887 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sox9Q04887 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox9Q04887 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.07□□□□□ -0.48
Sox9Q04887 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox9Q04887 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox9Q04887 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox9Q04887 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.07□□□□□ -0.48
Sox9Q04887 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 AC107763.1-201ENSMUST00000226082 1365 ntBASIC12.06□□□□□ -0.48
Sox9Q04887 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.06□□□□□ -0.48
Sox9Q04887 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC12.06□□□□□ -0.48
Sox9Q04887 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC12.06□□□□□ -0.48
Sox9Q04887 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 Gm28937-201ENSMUST00000185413 695 ntBASIC12.06□□□□□ -0.48
Sox9Q04887 Gm29400-201ENSMUST00000187208 695 ntBASIC12.06□□□□□ -0.48
Sox9Q04887 Gm28662-201ENSMUST00000188446 695 ntBASIC12.06□□□□□ -0.48
Sox9Q04887 Gm28251-201ENSMUST00000188835 695 ntBASIC12.06□□□□□ -0.48
Sox9Q04887 Gm8384-201ENSMUST00000190905 704 ntBASIC12.06□□□□□ -0.48
Sox9Q04887 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.06□□□□□ -0.48
Sox9Q04887 Gm37318-201ENSMUST00000194325 695 ntBASIC12.06□□□□□ -0.48
Sox9Q04887 Gm38017-201ENSMUST00000194768 695 ntBASIC12.06□□□□□ -0.48
Sox9Q04887 Gm37287-201ENSMUST00000195449 695 ntBASIC12.06□□□□□ -0.48
Sox9Q04887 Gm37793-201ENSMUST00000195548 695 ntBASIC12.06□□□□□ -0.48
Sox9Q04887 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 Gm45310-201ENSMUST00000210436 275 ntBASIC12.06□□□□□ -0.48
Sox9Q04887 Gm2594-201ENSMUST00000214774 742 ntBASIC12.06□□□□□ -0.48
Sox9Q04887 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC12.06□□□□□ -0.48
Sox9Q04887 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Sox9Q04887 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sox9Q04887 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sox9Q04887 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.06□□□□□ -0.48
Sox9Q04887 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sox9Q04887 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.06□□□□□ -0.48
Sox9Q04887 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox9Q04887 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.06□□□□□ -0.48
Sox9Q04887 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox9Q04887 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Sox9Q04887 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox9Q04887 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox9Q04887 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox9Q04887 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sox9Q04887 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox9Q04887 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Sox9Q04887 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.05□□□□□ -0.48
Sox9Q04887 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox9Q04887 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox9Q04887 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox9Q04887 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox9Q04887 Gm23745-201ENSMUST00000104230 125 ntBASIC12.05□□□□□ -0.48
Sox9Q04887 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC12.05□□□□□ -0.48
Sox9Q04887 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox9Q04887 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox9Q04887 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms