Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Otx1P80205 Gm12196-201ENSMUST00000120954 262 ntBASIC10.07□□□□□ -0.8
Otx1P80205 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.07□□□□□ -0.8
Otx1P80205 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Otx1P80205 Gm8815-201ENSMUST00000173809 620 ntBASIC10.07□□□□□ -0.8
Otx1P80205 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.07□□□□□ -0.8
Otx1P80205 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.07□□□□□ -0.8
Otx1P80205 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.07□□□□□ -0.8
Otx1P80205 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.07□□□□□ -0.8
Otx1P80205 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.07□□□□□ -0.8
Otx1P80205 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Otx1P80205 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Otx1P80205 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Otx1P80205 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Otx1P80205 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Otx1P80205 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Otx1P80205 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Otx1P80205 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Otx1P80205 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Otx1P80205 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Otx1P80205 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Otx1P80205 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Otx1P80205 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Otx1P80205 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.07□□□□□ -0.8
Otx1P80205 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.07□□□□□ -0.8
Otx1P80205 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Otx1P80205 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Otx1P80205 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Otx1P80205 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.06□□□□□ -0.8
Otx1P80205 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.06□□□□□ -0.8
Otx1P80205 Gm23200-201ENSMUST00000104379 132 ntBASIC10.06□□□□□ -0.8
Otx1P80205 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Gm11500-201ENSMUST00000118237 601 ntBASIC10.06□□□□□ -0.8
Otx1P80205 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC10.06□□□□□ -0.8
Otx1P80205 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.06□□□□□ -0.8
Otx1P80205 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.06□□□□□ -0.8
Otx1P80205 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.06□□□□□ -0.8
Otx1P80205 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Otx1P80205 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.06□□□□□ -0.8
Otx1P80205 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.06□□□□□ -0.8
Otx1P80205 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.06□□□□□ -0.8
Otx1P80205 Gm43947-201ENSMUST00000203019 959 ntBASIC10.06□□□□□ -0.8
Otx1P80205 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.06□□□□□ -0.8
Otx1P80205 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.06□□□□□ -0.8
Otx1P80205 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.06□□□□□ -0.8
Otx1P80205 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.06□□□□□ -0.8
Otx1P80205 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.06□□□□□ -0.8
Otx1P80205 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.06□□□□□ -0.8
Otx1P80205 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.06□□□□□ -0.8
Otx1P80205 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.06□□□□□ -0.8
Otx1P80205 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otx1P80205 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otx1P80205 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otx1P80205 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Otx1P80205 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otx1P80205 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Otx1P80205 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.05□□□□□ -0.8
Otx1P80205 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otx1P80205 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otx1P80205 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otx1P80205 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Otx1P80205 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otx1P80205 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otx1P80205 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Otx1P80205 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Otx1P80205 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC10.05□□□□□ -0.8
Otx1P80205 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms