Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Msx3P70354 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.97□□□□□ -0.49
Msx3P70354 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.96□□□□□ -0.49
Msx3P70354 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.96□□□□□ -0.49
Msx3P70354 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.96□□□□□ -0.49
Msx3P70354 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Msx3P70354 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx3P70354 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.96□□□□□ -0.49
Msx3P70354 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Msx3P70354 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.96□□□□□ -0.49
Msx3P70354 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx3P70354 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Msx3P70354 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Msx3P70354 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Msx3P70354 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx3P70354 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.96□□□□□ -0.49
Msx3P70354 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Msx3P70354 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx3P70354 Gm12857-201ENSMUST00000117678 592 ntBASIC11.96□□□□□ -0.49
Msx3P70354 Gm15711-201ENSMUST00000118889 535 ntBASIC11.96□□□□□ -0.49
Msx3P70354 Gm26083-201ENSMUST00000157904 193 ntBASIC11.96□□□□□ -0.49
Msx3P70354 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Msx3P70354 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.96□□□□□ -0.49
Msx3P70354 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.96□□□□□ -0.49
Msx3P70354 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Msx3P70354 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx3P70354 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.96□□□□□ -0.49
Msx3P70354 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.96□□□□□ -0.49
Msx3P70354 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Msx3P70354 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Msx3P70354 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Msx3P70354 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Msx3P70354 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Msx3P70354 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Msx3P70354 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.96□□□□□ -0.5
Msx3P70354 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Msx3P70354 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Msx3P70354 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Msx3P70354 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.96□□□□□ -0.5
Msx3P70354 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Msx3P70354 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Msx3P70354 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Msx3P70354 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.95□□□□□ -0.5
Msx3P70354 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.95□□□□□ -0.5
Msx3P70354 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Msx3P70354 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Msx3P70354 Gm14724-201ENSMUST00000118400 537 ntBASIC11.95□□□□□ -0.5
Msx3P70354 Gm11783-201ENSMUST00000119549 885 ntBASIC11.95□□□□□ -0.5
Msx3P70354 Gm8566-201ENSMUST00000120174 465 ntBASIC11.95□□□□□ -0.5
Msx3P70354 Gm3329-201ENSMUST00000159873 556 ntBASIC11.95□□□□□ -0.5
Msx3P70354 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Msx3P70354 Gm5714-201ENSMUST00000197343 566 ntBASIC11.95□□□□□ -0.5
Msx3P70354 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.95□□□□□ -0.5
Msx3P70354 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.95□□□□□ -0.5
Msx3P70354 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.95□□□□□ -0.5
Msx3P70354 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.95□□□□□ -0.5
Msx3P70354 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Msx3P70354 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Msx3P70354 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Msx3P70354 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.95□□□□□ -0.5
Msx3P70354 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Msx3P70354 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msx3P70354 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx3P70354 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx3P70354 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx3P70354 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.94□□□□□ -0.5
Msx3P70354 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx3P70354 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx3P70354 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msx3P70354 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx3P70354 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx3P70354 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msx3P70354 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx3P70354 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms