Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Pdlim4P70271 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.73□□□□□ -0.85
Pdlim4P70271 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Pdlim4P70271 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Pdlim4P70271 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
Pdlim4P70271 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.73□□□□□ -0.85
Pdlim4P70271 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Pdlim4P70271 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC9.73□□□□□ -0.85
Pdlim4P70271 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Pdlim4P70271 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Gm28686-201ENSMUST00000187404 609 ntBASIC9.73□□□□□ -0.85
Pdlim4P70271 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
Pdlim4P70271 Gm21027-201ENSMUST00000219300 1236 ntBASIC9.73□□□□□ -0.85
Pdlim4P70271 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC9.73□□□□□ -0.85
Pdlim4P70271 CT025694.1-201ENSMUST00000226188 934 ntBASIC9.73□□□□□ -0.85
Pdlim4P70271 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Pdlim4P70271 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC9.73□□□□□ -0.85
Pdlim4P70271 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC9.73□□□□□ -0.85
Pdlim4P70271 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Gm37348-201ENSMUST00000193104 1789 ntBASIC9.73□□□□□ -0.85
Pdlim4P70271 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 AC113441.2-201ENSMUST00000221538 1468 ntBASIC9.72□□□□□ -0.85
Pdlim4P70271 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Pdlim4P70271 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Pdlim4P70271 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Pdlim4P70271 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Pdlim4P70271 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Pdlim4P70271 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.72□□□□□ -0.85
Pdlim4P70271 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC9.72□□□□□ -0.85
Pdlim4P70271 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Gm23596-201ENSMUST00000104304 132 ntBASIC9.72□□□□□ -0.85
Pdlim4P70271 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC9.72□□□□□ -0.85
Pdlim4P70271 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.72□□□□□ -0.85
Pdlim4P70271 Gm16481-201ENSMUST00000119074 1227 ntBASIC9.72□□□□□ -0.85
Pdlim4P70271 Gm15004-201ENSMUST00000119192 630 ntBASIC9.72□□□□□ -0.85
Pdlim4P70271 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Pdlim4P70271 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC9.72□□□□□ -0.85
Pdlim4P70271 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Gm17040-202ENSMUST00000170597 889 ntBASIC9.72□□□□□ -0.85
Pdlim4P70271 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Mir6927-201ENSMUST00000184494 71 ntBASIC9.72□□□□□ -0.85
Pdlim4P70271 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Pdlim4P70271 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Rassf8-202ENSMUST00000058538 1131 ntBASIC9.72□□□□□ -0.85
Pdlim4P70271 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pdlim4P70271 AC122291.1-201ENSMUST00000228937 5748 ntBASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms