Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm3P62311 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm3P62311 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm3P62311 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC10.55□□□□□ -0.72
Lsm3P62311 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm3P62311 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Lsm3P62311 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm3P62311 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm3P62311 Gm10417-201ENSMUST00000194341 3522 ntBASIC10.55□□□□□ -0.72
Lsm3P62311 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Lsm3P62311 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm3P62311 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Lsm3P62311 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm3P62311 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm3P62311 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm3P62311 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm3P62311 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm3P62311 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Lsm3P62311 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Lsm3P62311 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm3P62311 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm3P62311 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm3P62311 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Lsm3P62311 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.54□□□□□ -0.72
Lsm3P62311 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Lsm3P62311 Gm12203-201ENSMUST00000118235 598 ntBASIC10.54□□□□□ -0.72
Lsm3P62311 Gm13612-201ENSMUST00000119276 390 ntBASIC10.54□□□□□ -0.72
Lsm3P62311 Gm12209-201ENSMUST00000120089 596 ntBASIC10.54□□□□□ -0.72
Lsm3P62311 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Lsm3P62311 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm3P62311 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm3P62311 Gm8810-201ENSMUST00000172895 754 ntBASIC10.54□□□□□ -0.72
Lsm3P62311 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC10.54□□□□□ -0.72
Lsm3P62311 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.54□□□□□ -0.72
Lsm3P62311 Gm44405-201ENSMUST00000198952 126 ntBASIC10.54□□□□□ -0.72
Lsm3P62311 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Lsm3P62311 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm3P62311 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm3P62311 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm3P62311 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm3P62311 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm3P62311 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Lsm3P62311 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.54□□□□□ -0.72
Lsm3P62311 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm3P62311 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm3P62311 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm3P62311 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm3P62311 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Lsm3P62311 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC10.54□□□□□ -0.72
Lsm3P62311 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm3P62311 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Lsm3P62311 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Lsm3P62311 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm3P62311 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
Lsm3P62311 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm3P62311 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lsm3P62311 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.53□□□□□ -0.72
Lsm3P62311 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.53□□□□□ -0.72
Lsm3P62311 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Lsm3P62311 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Lsm3P62311 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.53□□□□□ -0.72
Lsm3P62311 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.53□□□□□ -0.72
Lsm3P62311 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Gm8213-201ENSMUST00000118191 441 ntBASIC10.53□□□□□ -0.72
Lsm3P62311 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.53□□□□□ -0.72
Lsm3P62311 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.53□□□□□ -0.72
Lsm3P62311 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Mir6392-201ENSMUST00000184924 108 ntBASIC10.53□□□□□ -0.72
Lsm3P62311 Gm28631-201ENSMUST00000190740 334 ntBASIC10.53□□□□□ -0.72
Lsm3P62311 Gm6439-201ENSMUST00000199849 862 ntBASIC10.53□□□□□ -0.72
Lsm3P62311 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.53□□□□□ -0.72
Lsm3P62311 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.53□□□□□ -0.72
Lsm3P62311 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC10.53□□□□□ -0.72
Lsm3P62311 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.53□□□□□ -0.72
Lsm3P62311 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Lsm3P62311 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms