Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
NcanP55066 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC12.25□□□□□ -0.45
NcanP55066 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.25□□□□□ -0.45
NcanP55066 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
NcanP55066 Gm25872-201ENSMUST00000177784 100 ntBASIC12.25□□□□□ -0.45
NcanP55066 Gm9630-201ENSMUST00000178304 885 ntBASIC12.25□□□□□ -0.45
NcanP55066 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.25□□□□□ -0.45
NcanP55066 Gm20781-201ENSMUST00000193154 693 ntBASIC12.25□□□□□ -0.45
NcanP55066 Gm21736-201ENSMUST00000195399 693 ntBASIC12.25□□□□□ -0.45
NcanP55066 Gm42751-201ENSMUST00000198065 559 ntBASIC12.25□□□□□ -0.45
NcanP55066 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC12.25□□□□□ -0.45
NcanP55066 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.25□□□□□ -0.45
NcanP55066 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.25□□□□□ -0.45
NcanP55066 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC12.25□□□□□ -0.45
NcanP55066 CT030166.5-201ENSMUST00000222249 420 ntBASIC12.25□□□□□ -0.45
NcanP55066 Id2-203ENSMUST00000222667 958 ntBASIC12.25□□□□□ -0.45
NcanP55066 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 Gm26782-203ENSMUST00000227103 751 ntBASIC12.25□□□□□ -0.45
NcanP55066 AC154213.1-201ENSMUST00000228234 583 ntBASIC12.25□□□□□ -0.45
NcanP55066 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
NcanP55066 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC12.25□□□□□ -0.45
NcanP55066 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 AC154354.1-203ENSMUST00000225565 1364 ntBASIC12.25□□□□□ -0.45
NcanP55066 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
NcanP55066 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.25□□□□□ -0.45
NcanP55066 Gm44106-201ENSMUST00000203153 1599 ntBASIC12.25□□□□□ -0.45
NcanP55066 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 Gm43167-201ENSMUST00000202001 1606 ntBASIC12.25□□□□□ -0.45
NcanP55066 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.25□□□□□ -0.45
NcanP55066 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.25□□□□□ -0.45
NcanP55066 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
NcanP55066 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NcanP55066 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NcanP55066 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NcanP55066 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.24□□□□□ -0.45
NcanP55066 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NcanP55066 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NcanP55066 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
NcanP55066 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NcanP55066 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
NcanP55066 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
NcanP55066 Gm23129-201ENSMUST00000104259 132 ntBASIC12.24□□□□□ -0.45
NcanP55066 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
NcanP55066 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NcanP55066 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NcanP55066 Gm22344-201ENSMUST00000122642 278 ntBASIC12.24□□□□□ -0.45
NcanP55066 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NcanP55066 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NcanP55066 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NcanP55066 Cd9-ps-201ENSMUST00000174687 650 ntBASIC12.24□□□□□ -0.45
NcanP55066 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
NcanP55066 Gm29067-201ENSMUST00000190821 470 ntBASIC12.24□□□□□ -0.45
NcanP55066 Gm43244-201ENSMUST00000196994 1285 ntBASIC12.24□□□□□ -0.45
NcanP55066 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.24□□□□□ -0.45
NcanP55066 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC12.24□□□□□ -0.45
NcanP55066 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NcanP55066 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NcanP55066 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
NcanP55066 Gm18042-201ENSMUST00000219887 790 ntBASIC12.24□□□□□ -0.45
NcanP55066 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC12.24□□□□□ -0.45
NcanP55066 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC12.24□□□□□ -0.45
NcanP55066 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NcanP55066 AC122035.1-201ENSMUST00000227576 1016 ntBASIC12.24□□□□□ -0.45
NcanP55066 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NcanP55066 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NcanP55066 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NcanP55066 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.24□□□□□ -0.45
NcanP55066 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NcanP55066 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NcanP55066 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NcanP55066 Gm25580-201ENSMUST00000083409 327 ntBASIC12.24□□□□□ -0.45
NcanP55066 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NcanP55066 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
NcanP55066 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NcanP55066 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NcanP55066 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NcanP55066 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NcanP55066 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
NcanP55066 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.23□□□□□ -0.45
NcanP55066 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms