Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm21778-201ENSMUST00000178779 471 ntBASIC14.7□□□□□ -0.06
Msh6P54276 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC14.7□□□□□ -0.06
Msh6P54276 Gm6390-201ENSMUST00000215034 589 ntBASIC14.7□□□□□ -0.06
Msh6P54276 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh6P54276 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh6P54276 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh6P54276 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh6P54276 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.7□□□□□ -0.06
Msh6P54276 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Msh6P54276 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh6P54276 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh6P54276 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Msh6P54276 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Msh6P54276 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC14.69□□□□□ -0.06
Msh6P54276 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Msh6P54276 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Msh6P54276 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Gm37122-201ENSMUST00000195313 1567 ntBASIC14.69□□□□□ -0.06
Msh6P54276 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Msh6P54276 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.69□□□□□ -0.06
Msh6P54276 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Gm12247-201ENSMUST00000117585 670 ntBASIC14.69□□□□□ -0.06
Msh6P54276 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC14.69□□□□□ -0.06
Msh6P54276 Gm15549-201ENSMUST00000121595 622 ntBASIC14.69□□□□□ -0.06
Msh6P54276 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Msh6P54276 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC14.69□□□□□ -0.06
Msh6P54276 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Gm8451-201ENSMUST00000170338 447 ntBASIC14.69□□□□□ -0.06
Msh6P54276 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Msh6P54276 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Msh6P54276 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Gm19046-201ENSMUST00000221263 1298 ntBASIC14.69□□□□□ -0.06
Msh6P54276 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC14.69□□□□□ -0.06
Msh6P54276 AC130477.1-201ENSMUST00000226982 420 ntBASIC14.69□□□□□ -0.06
Msh6P54276 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Gm7536-201ENSMUST00000077389 444 ntBASIC14.69□□□□□ -0.06
Msh6P54276 Gm5453-201ENSMUST00000080866 447 ntBASIC14.69□□□□□ -0.06
Msh6P54276 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.69□□□□□ -0.06
Msh6P54276 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC14.69□□□□□ -0.06
Msh6P54276 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Msh6P54276 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh6P54276 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Msh6P54276 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh6P54276 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh6P54276 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Msh6P54276 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Msh6P54276 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh6P54276 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Msh6P54276 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Msh6P54276 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Msh6P54276 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Msh6P54276 Gm25492-201ENSMUST00000157383 129 ntBASIC14.68□□□□□ -0.06
Msh6P54276 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Msh6P54276 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Msh6P54276 Gm17709-201ENSMUST00000174536 1096 ntBASIC14.68□□□□□ -0.06
Msh6P54276 Gm9081-201ENSMUST00000182346 991 ntBASIC14.68□□□□□ -0.06
Msh6P54276 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Msh6P54276 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Msh6P54276 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC14.68□□□□□ -0.06
Msh6P54276 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC14.68□□□□□ -0.06
Msh6P54276 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh6P54276 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh6P54276 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Msh6P54276 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh6P54276 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh6P54276 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Msh6P54276 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Msh6P54276 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh6P54276 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Msh6P54276 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh6P54276 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Msh6P54276 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Msh6P54276 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh6P54276 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Msh6P54276 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms