Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fdft1P53798 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fdft1P53798 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fdft1P53798 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fdft1P53798 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Fdft1P53798 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.65□□□□□ -0.54
Fdft1P53798 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fdft1P53798 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.65□□□□□ -0.54
Fdft1P53798 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Fdft1P53798 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Fdft1P53798 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Fdft1P53798 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.65□□□□□ -0.54
Fdft1P53798 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Fdft1P53798 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fdft1P53798 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fdft1P53798 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fdft1P53798 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fdft1P53798 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.65□□□□□ -0.54
Fdft1P53798 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.65□□□□□ -0.54
Fdft1P53798 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Fdft1P53798 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fdft1P53798 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fdft1P53798 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fdft1P53798 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Fdft1P53798 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.65□□□□□ -0.54
Fdft1P53798 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fdft1P53798 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fdft1P53798 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fdft1P53798 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Fdft1P53798 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fdft1P53798 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Fdft1P53798 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fdft1P53798 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Fdft1P53798 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Fdft1P53798 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Fdft1P53798 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Fdft1P53798 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Fdft1P53798 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Fdft1P53798 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fdft1P53798 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fdft1P53798 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fdft1P53798 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Fdft1P53798 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Fdft1P53798 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Fdft1P53798 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Fdft1P53798 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Fdft1P53798 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fdft1P53798 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fdft1P53798 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.64□□□□□ -0.55
Fdft1P53798 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fdft1P53798 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Fdft1P53798 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.64□□□□□ -0.55
Fdft1P53798 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fdft1P53798 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Fdft1P53798 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Fdft1P53798 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Fdft1P53798 Gm6114-201ENSMUST00000182472 968 ntBASIC11.64□□□□□ -0.55
Fdft1P53798 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.64□□□□□ -0.55
Fdft1P53798 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Fdft1P53798 Gm17812-201ENSMUST00000204935 318 ntBASIC11.64□□□□□ -0.55
Fdft1P53798 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.64□□□□□ -0.55
Fdft1P53798 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Fdft1P53798 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Fdft1P53798 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Fdft1P53798 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fdft1P53798 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fdft1P53798 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Fdft1P53798 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fdft1P53798 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Fdft1P53798 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Fdft1P53798 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fdft1P53798 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Fdft1P53798 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fdft1P53798 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.64□□□□□ -0.55
Fdft1P53798 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fdft1P53798 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fdft1P53798 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Fdft1P53798 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.64□□□□□ -0.55
Fdft1P53798 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.64□□□□□ -0.55
Fdft1P53798 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Fdft1P53798 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fdft1P53798 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fdft1P53798 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Fdft1P53798 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Fdft1P53798 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.63□□□□□ -0.55
Fdft1P53798 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.63□□□□□ -0.55
Fdft1P53798 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.63□□□□□ -0.55
Fdft1P53798 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.63□□□□□ -0.55
Fdft1P53798 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Fdft1P53798 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Fdft1P53798 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Rgr-203ENSMUST00000225070 4704 ntBASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms