Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.22□□□□□ -0.61
Sox3P53784 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Sox3P53784 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.22□□□□□ -0.61
Sox3P53784 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.22□□□□□ -0.61
Sox3P53784 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Sox3P53784 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.22□□□□□ -0.61
Sox3P53784 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.22□□□□□ -0.61
Sox3P53784 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Gm13809-201ENSMUST00000117921 597 ntBASIC11.22□□□□□ -0.61
Sox3P53784 Gm12314-201ENSMUST00000118104 538 ntBASIC11.22□□□□□ -0.61
Sox3P53784 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.22□□□□□ -0.61
Sox3P53784 Gm13315-201ENSMUST00000120376 991 ntBASIC11.22□□□□□ -0.61
Sox3P53784 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.22□□□□□ -0.61
Sox3P53784 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Gm4726-201ENSMUST00000135604 736 ntBASIC11.22□□□□□ -0.61
Sox3P53784 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Gm6019-201ENSMUST00000148369 736 ntBASIC11.22□□□□□ -0.61
Sox3P53784 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sox3P53784 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Sox3P53784 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.22□□□□□ -0.61
Sox3P53784 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.22□□□□□ -0.61
Sox3P53784 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sox3P53784 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.22□□□□□ -0.61
Sox3P53784 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sox3P53784 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox3P53784 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox3P53784 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.21□□□□□ -0.61
Sox3P53784 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox3P53784 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox3P53784 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox3P53784 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Sox3P53784 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Sox3P53784 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Sox3P53784 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.61
Sox3P53784 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.21□□□□□ -0.61
Sox3P53784 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.21□□□□□ -0.61
Sox3P53784 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox3P53784 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox3P53784 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Sox3P53784 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox3P53784 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox3P53784 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox3P53784 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox3P53784 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox3P53784 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox3P53784 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox3P53784 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.21□□□□□ -0.61
Sox3P53784 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox3P53784 Gm7541-201ENSMUST00000118361 535 ntBASIC11.21□□□□□ -0.61
Sox3P53784 Gm1848-201ENSMUST00000120711 789 ntBASIC11.21□□□□□ -0.61
Sox3P53784 Gm13182-201ENSMUST00000122241 312 ntBASIC11.21□□□□□ -0.61
Sox3P53784 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox3P53784 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox3P53784 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Sox3P53784 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.21□□□□□ -0.61
Sox3P53784 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.21□□□□□ -0.61
Sox3P53784 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox3P53784 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Sox3P53784 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox3P53784 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox3P53784 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sox3P53784 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sox3P53784 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox3P53784 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox3P53784 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sox3P53784 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox3P53784 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox3P53784 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox3P53784 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox3P53784 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sox3P53784 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox3P53784 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Sox3P53784 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
Sox3P53784 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox3P53784 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms