Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Gm11591-201ENSMUST00000120063 702 ntBASIC9.64□□□□□ -0.87
Nkx2-1P50220 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC9.64□□□□□ -0.87
Nkx2-1P50220 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Snora78-201ENSMUST00000158630 128 ntBASIC9.64□□□□□ -0.87
Nkx2-1P50220 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC9.64□□□□□ -0.87
Nkx2-1P50220 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC9.64□□□□□ -0.87
Nkx2-1P50220 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.63□□□□□ -0.87
Nkx2-1P50220 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Gm14005-209ENSMUST00000224993 1832 ntBASIC9.63□□□□□ -0.87
Nkx2-1P50220 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Gm42141-201ENSMUST00000196534 2172 ntBASIC9.63□□□□□ -0.87
Nkx2-1P50220 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC9.63□□□□□ -0.87
Nkx2-1P50220 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC9.63□□□□□ -0.87
Nkx2-1P50220 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Erich3-203ENSMUST00000189969 3460 ntBASIC9.63□□□□□ -0.87
Nkx2-1P50220 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx2-1P50220 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.63□□□□□ -0.87
Nkx2-1P50220 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Nkx2-1P50220 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx2-1P50220 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Gm15991-202ENSMUST00000212123 3565 ntBASIC9.62□□□□□ -0.87
Nkx2-1P50220 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx2-1P50220 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms