Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Rfx3P48381 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Rfx3P48381 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.53□□□□□ -0.72
Rfx3P48381 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Rfx3P48381 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.53□□□□□ -0.72
Rfx3P48381 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.53□□□□□ -0.72
Rfx3P48381 Gm14381-201ENSMUST00000122105 414 ntBASIC10.53□□□□□ -0.72
Rfx3P48381 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.53□□□□□ -0.72
Rfx3P48381 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.53□□□□□ -0.72
Rfx3P48381 Mir8109-201ENSMUST00000184375 117 ntBASIC10.53□□□□□ -0.72
Rfx3P48381 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.53□□□□□ -0.72
Rfx3P48381 Gm7895-201ENSMUST00000187459 1173 ntBASIC10.53□□□□□ -0.72
Rfx3P48381 Gm9136-201ENSMUST00000193368 454 ntBASIC10.53□□□□□ -0.72
Rfx3P48381 Gm18893-201ENSMUST00000198416 943 ntBASIC10.53□□□□□ -0.72
Rfx3P48381 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.53□□□□□ -0.72
Rfx3P48381 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.53□□□□□ -0.72
Rfx3P48381 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.53□□□□□ -0.72
Rfx3P48381 Gm44651-201ENSMUST00000207343 372 ntBASIC10.53□□□□□ -0.72
Rfx3P48381 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.53□□□□□ -0.72
Rfx3P48381 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.53□□□□□ -0.72
Rfx3P48381 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.53□□□□□ -0.72
Rfx3P48381 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.53□□□□□ -0.72
Rfx3P48381 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.53□□□□□ -0.72
Rfx3P48381 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Rfx3P48381 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Rfx3P48381 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Rfx3P48381 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.53□□□□□ -0.72
Rfx3P48381 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Rfx3P48381 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.53□□□□□ -0.72
Rfx3P48381 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rfx3P48381 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Rfx3P48381 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Rfx3P48381 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Rfx3P48381 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.52□□□□□ -0.72
Rfx3P48381 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rfx3P48381 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.52□□□□□ -0.73
Rfx3P48381 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rfx3P48381 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rfx3P48381 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rfx3P48381 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rfx3P48381 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.52□□□□□ -0.73
Rfx3P48381 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rfx3P48381 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.52□□□□□ -0.73
Rfx3P48381 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.52□□□□□ -0.73
Rfx3P48381 Gm38341-201ENSMUST00000195357 515 ntBASIC10.52□□□□□ -0.73
Rfx3P48381 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rfx3P48381 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rfx3P48381 Gm45598-202ENSMUST00000210719 986 ntBASIC10.52□□□□□ -0.73
Rfx3P48381 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.52□□□□□ -0.73
Rfx3P48381 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rfx3P48381 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.52□□□□□ -0.73
Rfx3P48381 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rfx3P48381 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rfx3P48381 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Rfx3P48381 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rfx3P48381 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rfx3P48381 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.52□□□□□ -0.73
Rfx3P48381 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.52□□□□□ -0.73
Rfx3P48381 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rfx3P48381 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rfx3P48381 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.73
Rfx3P48381 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
Rfx3P48381 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rfx3P48381 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.52□□□□□ -0.73
Rfx3P48381 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rfx3P48381 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.52□□□□□ -0.73
Rfx3P48381 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rfx3P48381 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.52□□□□□ -0.73
Rfx3P48381 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Rfx3P48381 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Rfx3P48381 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.52□□□□□ -0.73
Rfx3P48381 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rfx3P48381 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rfx3P48381 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rfx3P48381 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rfx3P48381 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rfx3P48381 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms