Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Tnfsf4P43488 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.22□□□□□ -0.61
Tnfsf4P43488 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.22□□□□□ -0.61
Tnfsf4P43488 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Gm6334-201ENSMUST00000207083 228 ntBASIC11.22□□□□□ -0.61
Tnfsf4P43488 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Gm18065-201ENSMUST00000221395 526 ntBASIC11.22□□□□□ -0.61
Tnfsf4P43488 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfsf4P43488 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.21□□□□□ -0.61
Tnfsf4P43488 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.21□□□□□ -0.61
Tnfsf4P43488 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Tnfsf4P43488 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.21□□□□□ -0.61
Tnfsf4P43488 Gm10478-201ENSMUST00000084451 396 ntBASIC11.21□□□□□ -0.61
Tnfsf4P43488 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.61
Tnfsf4P43488 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfsf4P43488 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfsf4P43488 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfsf4P43488 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Tnfsf4P43488 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfsf4P43488 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfsf4P43488 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.21□□□□□ -0.62
Tnfsf4P43488 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfsf4P43488 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.21□□□□□ -0.62
Tnfsf4P43488 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.21□□□□□ -0.62
Tnfsf4P43488 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfsf4P43488 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfsf4P43488 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.21□□□□□ -0.62
Tnfsf4P43488 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfsf4P43488 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 102.3 ms