Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm17797-201ENSMUST00000182175 997 ntBASIC17.07■□□□□ 0.32
Chd1P40201 Gm45893-201ENSMUST00000211899 247 ntBASIC17.07■□□□□ 0.32
Chd1P40201 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1P40201 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC17.07■□□□□ 0.32
Chd1P40201 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Chd1P40201 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Chd1P40201 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1P40201 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1P40201 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1P40201 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1P40201 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1P40201 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1P40201 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1P40201 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1P40201 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1P40201 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1P40201 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Chd1P40201 Gm5071-201ENSMUST00000104922 1035 ntBASIC17.07■□□□□ 0.32
Chd1P40201 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC17.07■□□□□ 0.32
Chd1P40201 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1P40201 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1P40201 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1P40201 CT009713.2-201ENSMUST00000225532 1149 ntBASIC17.07■□□□□ 0.32
Chd1P40201 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1P40201 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Chd1P40201 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1P40201 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1P40201 Gm19027-201ENSMUST00000187291 1355 ntBASIC17.07■□□□□ 0.32
Chd1P40201 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1P40201 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Chd1P40201 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Chd1P40201 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1P40201 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1P40201 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1P40201 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Chd1P40201 Acot6-202ENSMUST00000222921 3622 ntBASIC17.06■□□□□ 0.32
Chd1P40201 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1P40201 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1P40201 Gm38346-201ENSMUST00000192379 2639 ntBASIC17.06■□□□□ 0.32
Chd1P40201 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Chd1P40201 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1P40201 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1P40201 Ifna6-201ENSMUST00000105146 570 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Chd1P40201 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1P40201 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC17.06■□□□□ 0.32
Chd1P40201 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC17.06■□□□□ 0.32
Chd1P40201 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC17.06■□□□□ 0.32
Chd1P40201 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC17.06■□□□□ 0.32
Chd1P40201 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Chd1P40201 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Chd1P40201 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Chd1P40201 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Chd1P40201 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Chd1P40201 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC17.06■□□□□ 0.32
Chd1P40201 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1P40201 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1P40201 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1P40201 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC17.06■□□□□ 0.32
Chd1P40201 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1P40201 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1P40201 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1P40201 Gm42651-201ENSMUST00000199851 1339 ntBASIC17.06■□□□□ 0.32
Chd1P40201 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd1P40201 AC116503.1-201ENSMUST00000215445 2192 ntBASIC17.05■□□□□ 0.32
Chd1P40201 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd1P40201 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC17.05■□□□□ 0.32
Chd1P40201 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd1P40201 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Chd1P40201 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chd1P40201 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chd1P40201 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.05■□□□□ 0.32
Chd1P40201 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC17.05■□□□□ 0.32
Chd1P40201 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd1P40201 Gm12377-201ENSMUST00000118656 252 ntBASIC17.05■□□□□ 0.32
Chd1P40201 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chd1P40201 Gm5873-201ENSMUST00000177157 1066 ntBASIC17.05■□□□□ 0.32
Chd1P40201 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC17.05■□□□□ 0.32
Chd1P40201 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd1P40201 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd1P40201 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd1P40201 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chd1P40201 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd1P40201 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd1P40201 Gm5174-201ENSMUST00000171131 1423 ntBASIC17.05■□□□□ 0.32
Chd1P40201 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd1P40201 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd1P40201 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd1P40201 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd1P40201 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd1P40201 Gm44153-201ENSMUST00000204162 1580 ntBASIC17.05■□□□□ 0.32
Chd1P40201 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chd1P40201 Gm13758-201ENSMUST00000118699 743 ntBASIC17.04■□□□□ 0.32
Chd1P40201 Gm40414-201ENSMUST00000197608 481 ntBASIC17.04■□□□□ 0.32
Chd1P40201 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC17.04■□□□□ 0.32
Chd1P40201 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chd1P40201 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chd1P40201 AC139155.1-201ENSMUST00000226043 444 ntBASIC17.04■□□□□ 0.32
Chd1P40201 AC153524.2-202ENSMUST00000220401 1794 ntBASIC17.04■□□□□ 0.32
Chd1P40201 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chd1P40201 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms