Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 AC165260.2-201ENSMUST00000225371 395 ntBASIC15.06■□□□□ 0
Col18a1P39061 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Col18a1P39061 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col18a1P39061 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
Col18a1P39061 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col18a1P39061 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Col18a1P39061 Gm38111-201ENSMUST00000194817 2741 ntBASIC15.05■□□□□ 0
Col18a1P39061 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC15.05■□□□□ 0
Col18a1P39061 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Col18a1P39061 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col18a1P39061 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col18a1P39061 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col18a1P39061 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col18a1P39061 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Col18a1P39061 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col18a1P39061 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col18a1P39061 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC15.05■□□□□ -0
Col18a1P39061 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col18a1P39061 Gm13857-201ENSMUST00000139645 173 ntBASIC15.05■□□□□ -0
Col18a1P39061 Gm25154-201ENSMUST00000157123 119 ntBASIC15.05■□□□□ -0
Col18a1P39061 Gm27390-201ENSMUST00000184516 176 ntBASIC15.05■□□□□ -0
Col18a1P39061 AC164614.1-201ENSMUST00000216038 397 ntBASIC15.05■□□□□ -0
Col18a1P39061 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col18a1P39061 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Col18a1P39061 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Col18a1P39061 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.05■□□□□ -0
Col18a1P39061 Gm44292-201ENSMUST00000205194 2364 ntBASIC15.05■□□□□ -0
Col18a1P39061 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC15.05■□□□□ -0
Col18a1P39061 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col18a1P39061 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC15.04■□□□□ -0
Col18a1P39061 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col18a1P39061 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Col18a1P39061 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col18a1P39061 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Col18a1P39061 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.04■□□□□ -0
Col18a1P39061 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col18a1P39061 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col18a1P39061 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col18a1P39061 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC15.04■□□□□ -0
Col18a1P39061 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col18a1P39061 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col18a1P39061 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC15.04■□□□□ -0
Col18a1P39061 Gm14231-201ENSMUST00000120090 592 ntBASIC15.04■□□□□ -0
Col18a1P39061 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC15.04■□□□□ -0
Col18a1P39061 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC15.04■□□□□ -0
Col18a1P39061 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC15.04■□□□□ -0
Col18a1P39061 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col18a1P39061 Gm43760-201ENSMUST00000202120 3015 ntBASIC15.04■□□□□ -0
Col18a1P39061 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col18a1P39061 Gm7642-201ENSMUST00000216345 1809 ntBASIC15.04■□□□□ -0
Col18a1P39061 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col18a1P39061 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col18a1P39061 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.04■□□□□ -0
Col18a1P39061 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
Col18a1P39061 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col18a1P39061 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Col18a1P39061 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Col18a1P39061 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col18a1P39061 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Col18a1P39061 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col18a1P39061 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col18a1P39061 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col18a1P39061 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Col18a1P39061 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC15.04■□□□□ -0
Col18a1P39061 AC153524.2-202ENSMUST00000220401 1794 ntBASIC15.04■□□□□ -0
Col18a1P39061 Gm7781-201ENSMUST00000117258 788 ntBASIC15.03■□□□□ -0
Col18a1P39061 Gm12377-201ENSMUST00000118656 252 ntBASIC15.03■□□□□ -0
Col18a1P39061 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col18a1P39061 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col18a1P39061 Gm8464-202ENSMUST00000146697 1142 ntBASIC15.03■□□□□ -0
Col18a1P39061 Gm4750-201ENSMUST00000151942 1142 ntBASIC15.03■□□□□ -0
Col18a1P39061 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC15.03■□□□□ -0
Col18a1P39061 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col18a1P39061 AC159006.3-201ENSMUST00000226918 664 ntBASIC15.03■□□□□ -0
Col18a1P39061 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col18a1P39061 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col18a1P39061 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col18a1P39061 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Col18a1P39061 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC15.03■□□□□ -0
Col18a1P39061 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col18a1P39061 Gm45124-201ENSMUST00000206723 2755 ntBASIC15.03■□□□□ -0
Col18a1P39061 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col18a1P39061 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Col18a1P39061 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col18a1P39061 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col18a1P39061 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col18a1P39061 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col18a1P39061 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col18a1P39061 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC15.03■□□□□ -0
Col18a1P39061 CT009713.2-201ENSMUST00000225532 1149 ntBASIC15.03■□□□□ -0
Col18a1P39061 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Col18a1P39061 AC154197.1-201ENSMUST00000225136 1382 ntBASIC15.03■□□□□ -0
Col18a1P39061 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col18a1P39061 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col18a1P39061 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col18a1P39061 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col18a1P39061 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col18a1P39061 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Col18a1P39061 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col18a1P39061 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms