Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.27□□□□□ -0.45
Rfc1P35601 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rfc1P35601 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rfc1P35601 Gm44405-201ENSMUST00000198952 126 ntBASIC12.27□□□□□ -0.45
Rfc1P35601 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.27□□□□□ -0.45
Rfc1P35601 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfc1P35601 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.27□□□□□ -0.45
Rfc1P35601 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfc1P35601 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfc1P35601 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfc1P35601 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Rfc1P35601 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfc1P35601 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfc1P35601 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rfc1P35601 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC12.27□□□□□ -0.45
Rfc1P35601 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfc1P35601 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfc1P35601 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rfc1P35601 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfc1P35601 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfc1P35601 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.27□□□□□ -0.45
Rfc1P35601 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rfc1P35601 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfc1P35601 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfc1P35601 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfc1P35601 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfc1P35601 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Rfc1P35601 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfc1P35601 Gm43143-201ENSMUST00000196083 2023 ntBASIC12.27□□□□□ -0.45
Rfc1P35601 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rfc1P35601 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfc1P35601 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rfc1P35601 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.26□□□□□ -0.45
Rfc1P35601 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfc1P35601 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfc1P35601 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfc1P35601 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rfc1P35601 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Rfc1P35601 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfc1P35601 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rfc1P35601 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfc1P35601 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfc1P35601 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC12.26□□□□□ -0.45
Rfc1P35601 Gm24830-201ENSMUST00000102024 166 ntBASIC12.26□□□□□ -0.45
Rfc1P35601 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rfc1P35601 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.26□□□□□ -0.45
Rfc1P35601 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Rfc1P35601 Gm7809-201ENSMUST00000153199 742 ntBASIC12.26□□□□□ -0.45
Rfc1P35601 Gm25261-201ENSMUST00000157416 134 ntBASIC12.26□□□□□ -0.45
Rfc1P35601 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.26□□□□□ -0.45
Rfc1P35601 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfc1P35601 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.26□□□□□ -0.45
Rfc1P35601 Gm8738-201ENSMUST00000172606 329 ntBASIC12.26□□□□□ -0.45
Rfc1P35601 Gm3890-201ENSMUST00000182416 207 ntBASIC12.26□□□□□ -0.45
Rfc1P35601 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rfc1P35601 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rfc1P35601 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.26□□□□□ -0.45
Rfc1P35601 Gm5904-201ENSMUST00000210286 865 ntBASIC12.26□□□□□ -0.45
Rfc1P35601 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.26□□□□□ -0.45
Rfc1P35601 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.26□□□□□ -0.45
Rfc1P35601 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.26□□□□□ -0.45
Rfc1P35601 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfc1P35601 Gm26232-201ENSMUST00000083360 166 ntBASIC12.26□□□□□ -0.45
Rfc1P35601 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.26□□□□□ -0.45
Rfc1P35601 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfc1P35601 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.26□□□□□ -0.45
Rfc1P35601 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Rfc1P35601 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.26□□□□□ -0.45
Rfc1P35601 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfc1P35601 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfc1P35601 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfc1P35601 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfc1P35601 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfc1P35601 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rfc1P35601 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfc1P35601 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfc1P35601 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfc1P35601 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfc1P35601 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfc1P35601 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rfc1P35601 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rfc1P35601 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfc1P35601 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfc1P35601 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfc1P35601 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfc1P35601 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rfc1P35601 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rfc1P35601 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.25□□□□□ -0.45
Rfc1P35601 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rfc1P35601 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Rfc1P35601 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC12.25□□□□□ -0.45
Rfc1P35601 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.25□□□□□ -0.45
Rfc1P35601 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rfc1P35601 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rfc1P35601 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfc1P35601 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.25□□□□□ -0.45
Rfc1P35601 Gm15824-201ENSMUST00000119516 955 ntBASIC12.25□□□□□ -0.45
Rfc1P35601 Gm13829-201ENSMUST00000119600 138 ntBASIC12.25□□□□□ -0.45
Rfc1P35601 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.25□□□□□ -0.45
Rfc1P35601 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms