Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Gm19994-201ENSMUST00000217086 586 ntBASIC9.2□□□□□ -0.94
Rom1P32958 AC125206.2-201ENSMUST00000217454 574 ntBASIC9.2□□□□□ -0.94
Rom1P32958 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC9.2□□□□□ -0.94
Rom1P32958 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC9.2□□□□□ -0.94
Rom1P32958 AC160929.1-201ENSMUST00000221247 415 ntBASIC9.2□□□□□ -0.94
Rom1P32958 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC9.2□□□□□ -0.94
Rom1P32958 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 n-R5s195-201ENSMUST00000082891 119 ntBASIC9.2□□□□□ -0.94
Rom1P32958 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Rom1P32958 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Gm43579-201ENSMUST00000202387 1307 ntBASIC9.2□□□□□ -0.94
Rom1P32958 Gm5620-201ENSMUST00000077991 1348 ntBASIC9.2□□□□□ -0.94
Rom1P32958 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC9.2□□□□□ -0.94
Rom1P32958 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Rom1P32958 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Rom1P32958 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Rom1P32958 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC9.2□□□□□ -0.94
Rom1P32958 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Rom1P32958 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC9.2□□□□□ -0.94
Rom1P32958 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC9.2□□□□□ -0.94
Rom1P32958 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC9.19□□□□□ -0.94
Rom1P32958 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC9.19□□□□□ -0.94
Rom1P32958 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Rom1P32958 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC9.19□□□□□ -0.94
Rom1P32958 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Rom1P32958 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Rom1P32958 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
Rom1P32958 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC9.19□□□□□ -0.94
Rom1P32958 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC9.19□□□□□ -0.94
Rom1P32958 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC9.19□□□□□ -0.94
Rom1P32958 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC9.19□□□□□ -0.94
Rom1P32958 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC9.19□□□□□ -0.94
Rom1P32958 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Gm4935-201ENSMUST00000221316 1198 ntBASIC9.19□□□□□ -0.94
Rom1P32958 CT030657.3-201ENSMUST00000222707 1200 ntBASIC9.19□□□□□ -0.94
Rom1P32958 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC9.19□□□□□ -0.94
Rom1P32958 AC166095.1-201ENSMUST00000223731 1241 ntBASIC9.19□□□□□ -0.94
Rom1P32958 CT009713.10-202ENSMUST00000225734 696 ntBASIC9.19□□□□□ -0.94
Rom1P32958 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Rom1P32958 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Gm9115-201ENSMUST00000120192 1348 ntBASIC9.19□□□□□ -0.94
Rom1P32958 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC9.19□□□□□ -0.94
Rom1P32958 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Rom1P32958 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9.19□□□□□ -0.94
Rom1P32958 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC9.19□□□□□ -0.94
Rom1P32958 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC9.19□□□□□ -0.94
Rom1P32958 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC9.19□□□□□ -0.94
Rom1P32958 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Rom1P32958 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.19□□□□□ -0.94
Rom1P32958 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.19□□□□□ -0.94
Rom1P32958 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Rom1P32958 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Rom1P32958 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rom1P32958 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC9.18□□□□□ -0.94
Rom1P32958 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms