Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm42815-201ENSMUST00000198787 1470 ntBASIC13.06□□□□□ -0.32
Col2a1P28481 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.06□□□□□ -0.32
Col2a1P28481 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col2a1P28481 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.06□□□□□ -0.32
Col2a1P28481 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col2a1P28481 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Col2a1P28481 Gm7964-201ENSMUST00000051522 1378 ntBASIC13.06□□□□□ -0.32
Col2a1P28481 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col2a1P28481 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col2a1P28481 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col2a1P28481 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col2a1P28481 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col2a1P28481 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col2a1P28481 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col2a1P28481 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col2a1P28481 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col2a1P28481 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col2a1P28481 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.05□□□□□ -0.32
Col2a1P28481 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col2a1P28481 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.05□□□□□ -0.32
Col2a1P28481 Mir453-201ENSMUST00000104732 82 ntBASIC13.05□□□□□ -0.32
Col2a1P28481 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC13.05□□□□□ -0.32
Col2a1P28481 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col2a1P28481 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC13.05□□□□□ -0.32
Col2a1P28481 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Col2a1P28481 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col2a1P28481 Gm9102-201ENSMUST00000219250 465 ntBASIC13.05□□□□□ -0.32
Col2a1P28481 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC13.05□□□□□ -0.32
Col2a1P28481 CT573086.4-201ENSMUST00000226729 342 ntBASIC13.05□□□□□ -0.32
Col2a1P28481 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col2a1P28481 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col2a1P28481 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col2a1P28481 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col2a1P28481 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col2a1P28481 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col2a1P28481 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col2a1P28481 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col2a1P28481 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col2a1P28481 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Col2a1P28481 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col2a1P28481 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col2a1P28481 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col2a1P28481 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col2a1P28481 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col2a1P28481 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col2a1P28481 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.05□□□□□ -0.32
Col2a1P28481 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Col2a1P28481 Gm5822-201ENSMUST00000161562 1378 ntBASIC13.05□□□□□ -0.32
Col2a1P28481 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col2a1P28481 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col2a1P28481 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col2a1P28481 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col2a1P28481 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col2a1P28481 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.04□□□□□ -0.32
Col2a1P28481 Gm12663-201ENSMUST00000118481 958 ntBASIC13.04□□□□□ -0.32
Col2a1P28481 Gm14497-201ENSMUST00000119537 580 ntBASIC13.04□□□□□ -0.32
Col2a1P28481 Gm12129-201ENSMUST00000120104 1147 ntBASIC13.04□□□□□ -0.32
Col2a1P28481 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC13.04□□□□□ -0.32
Col2a1P28481 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Col2a1P28481 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC13.04□□□□□ -0.32
Col2a1P28481 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col2a1P28481 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col2a1P28481 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Col2a1P28481 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col2a1P28481 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col2a1P28481 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC13.04□□□□□ -0.32
Col2a1P28481 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.04□□□□□ -0.32
Col2a1P28481 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col2a1P28481 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Col2a1P28481 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col2a1P28481 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col2a1P28481 Adgrv1-214ENSMUST00000224088 1492 ntBASIC13.04□□□□□ -0.32
Col2a1P28481 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Col2a1P28481 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col2a1P28481 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col2a1P28481 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.04□□□□□ -0.32
Col2a1P28481 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col2a1P28481 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col2a1P28481 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Col2a1P28481 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col2a1P28481 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Col2a1P28481 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col2a1P28481 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col2a1P28481 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Col2a1P28481 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col2a1P28481 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col2a1P28481 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC13.04□□□□□ -0.32
Col2a1P28481 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col2a1P28481 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC13.04□□□□□ -0.32
Col2a1P28481 Gm19927-201ENSMUST00000185792 781 ntBASIC13.04□□□□□ -0.32
Col2a1P28481 AC160929.1-201ENSMUST00000221247 415 ntBASIC13.04□□□□□ -0.32
Col2a1P28481 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Col2a1P28481 CT025618.1-203ENSMUST00000227008 589 ntBASIC13.04□□□□□ -0.32
Col2a1P28481 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col2a1P28481 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col2a1P28481 Gm8181-201ENSMUST00000062242 669 ntBASIC13.04□□□□□ -0.32
Col2a1P28481 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col2a1P28481 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col2a1P28481 Gm25201-201ENSMUST00000083093 170 ntBASIC13.04□□□□□ -0.32
Col2a1P28481 Gm25580-201ENSMUST00000083409 327 ntBASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms