Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
VimP20152 Gm8463-201ENSMUST00000208573 613 ntBASIC11.78□□□□□ -0.52
VimP20152 Gm39404-201ENSMUST00000216350 313 ntBASIC11.78□□□□□ -0.52
VimP20152 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VimP20152 Gm45925-201ENSMUST00000218882 744 ntBASIC11.78□□□□□ -0.52
VimP20152 Gm45930-201ENSMUST00000221330 292 ntBASIC11.78□□□□□ -0.52
VimP20152 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.78□□□□□ -0.52
VimP20152 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
VimP20152 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.78□□□□□ -0.52
VimP20152 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
VimP20152 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
VimP20152 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VimP20152 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VimP20152 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VimP20152 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VimP20152 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VimP20152 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
VimP20152 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VimP20152 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VimP20152 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
VimP20152 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VimP20152 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
VimP20152 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
VimP20152 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.77□□□□□ -0.52
VimP20152 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VimP20152 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.77□□□□□ -0.52
VimP20152 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VimP20152 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VimP20152 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.77□□□□□ -0.52
VimP20152 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VimP20152 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
VimP20152 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VimP20152 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.77□□□□□ -0.52
VimP20152 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VimP20152 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
VimP20152 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.77□□□□□ -0.53
VimP20152 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VimP20152 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
VimP20152 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
VimP20152 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
VimP20152 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
VimP20152 Gm14247-201ENSMUST00000120950 237 ntBASIC11.77□□□□□ -0.53
VimP20152 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.77□□□□□ -0.53
VimP20152 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
VimP20152 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.77□□□□□ -0.53
VimP20152 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
VimP20152 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.77□□□□□ -0.53
VimP20152 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
VimP20152 Gm18711-201ENSMUST00000199341 750 ntBASIC11.77□□□□□ -0.53
VimP20152 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.77□□□□□ -0.53
VimP20152 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.77□□□□□ -0.53
VimP20152 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VimP20152 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.77□□□□□ -0.53
VimP20152 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VimP20152 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VimP20152 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
VimP20152 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VimP20152 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VimP20152 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
VimP20152 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VimP20152 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VimP20152 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
VimP20152 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
VimP20152 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VimP20152 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.77□□□□□ -0.53
VimP20152 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
VimP20152 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
VimP20152 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.77□□□□□ -0.53
VimP20152 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
VimP20152 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.76□□□□□ -0.53
VimP20152 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VimP20152 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.76□□□□□ -0.53
VimP20152 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VimP20152 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
VimP20152 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
VimP20152 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
VimP20152 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VimP20152 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
VimP20152 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
VimP20152 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VimP20152 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.76□□□□□ -0.53
VimP20152 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VimP20152 CT868720.1-201ENSMUST00000223069 2544 ntBASIC11.76□□□□□ -0.53
VimP20152 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.76□□□□□ -0.53
VimP20152 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VimP20152 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VimP20152 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.76□□□□□ -0.53
VimP20152 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.76□□□□□ -0.53
VimP20152 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.76□□□□□ -0.53
VimP20152 Gm5904-201ENSMUST00000210286 865 ntBASIC11.76□□□□□ -0.53
VimP20152 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.76□□□□□ -0.53
VimP20152 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VimP20152 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
VimP20152 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VimP20152 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VimP20152 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VimP20152 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
VimP20152 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VimP20152 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VimP20152 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms