Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmga1P17095 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hmga1P17095 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmga1P17095 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hmga1P17095 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmga1P17095 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Hmga1P17095 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Hmga1P17095 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hmga1P17095 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmga1P17095 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.85□□□□□ -0.51
Hmga1P17095 Gm8111-201ENSMUST00000117659 987 ntBASIC11.85□□□□□ -0.51
Hmga1P17095 Gm13422-201ENSMUST00000118834 504 ntBASIC11.85□□□□□ -0.51
Hmga1P17095 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.85□□□□□ -0.51
Hmga1P17095 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.85□□□□□ -0.51
Hmga1P17095 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hmga1P17095 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Hmga1P17095 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.85□□□□□ -0.51
Hmga1P17095 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmga1P17095 Gm44008-201ENSMUST00000204345 412 ntBASIC11.85□□□□□ -0.51
Hmga1P17095 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.85□□□□□ -0.51
Hmga1P17095 Gm30671-201ENSMUST00000214898 318 ntBASIC11.85□□□□□ -0.51
Hmga1P17095 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmga1P17095 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Hmga1P17095 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hmga1P17095 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.85□□□□□ -0.51
Hmga1P17095 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hmga1P17095 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmga1P17095 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmga1P17095 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Hmga1P17095 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.85□□□□□ -0.51
Hmga1P17095 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmga1P17095 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmga1P17095 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmga1P17095 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Hmga1P17095 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hmga1P17095 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hmga1P17095 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmga1P17095 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.85□□□□□ -0.51
Hmga1P17095 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmga1P17095 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hmga1P17095 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmga1P17095 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmga1P17095 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmga1P17095 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Hmga1P17095 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmga1P17095 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hmga1P17095 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Hmga1P17095 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Hmga1P17095 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.84□□□□□ -0.51
Hmga1P17095 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hmga1P17095 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hmga1P17095 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hmga1P17095 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Hmga1P17095 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Hmga1P17095 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hmga1P17095 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hmga1P17095 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Hmga1P17095 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Hmga1P17095 Gm14892-201ENSMUST00000117636 267 ntBASIC11.84□□□□□ -0.51
Hmga1P17095 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Hmga1P17095 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.84□□□□□ -0.51
Hmga1P17095 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hmga1P17095 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.84□□□□□ -0.51
Hmga1P17095 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.84□□□□□ -0.51
Hmga1P17095 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.84□□□□□ -0.51
Hmga1P17095 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hmga1P17095 Gm26134-201ENSMUST00000178484 110 ntBASIC11.84□□□□□ -0.51
Hmga1P17095 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hmga1P17095 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.84□□□□□ -0.51
Hmga1P17095 Mir6407-201ENSMUST00000184510 101 ntBASIC11.84□□□□□ -0.51
Hmga1P17095 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.84□□□□□ -0.51
Hmga1P17095 Gm28324-201ENSMUST00000187913 264 ntBASIC11.84□□□□□ -0.51
Hmga1P17095 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hmga1P17095 Gm29067-201ENSMUST00000190821 470 ntBASIC11.84□□□□□ -0.51
Hmga1P17095 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.84□□□□□ -0.51
Hmga1P17095 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.84□□□□□ -0.51
Hmga1P17095 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.84□□□□□ -0.51
Hmga1P17095 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.84□□□□□ -0.51
Hmga1P17095 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.84□□□□□ -0.51
Hmga1P17095 Gm18561-201ENSMUST00000206027 804 ntBASIC11.84□□□□□ -0.51
Hmga1P17095 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.84□□□□□ -0.51
Hmga1P17095 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.84□□□□□ -0.51
Hmga1P17095 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.84□□□□□ -0.51
Hmga1P17095 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.84□□□□□ -0.51
Hmga1P17095 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.84□□□□□ -0.51
Hmga1P17095 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.84□□□□□ -0.51
Hmga1P17095 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmga1P17095 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmga1P17095 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Hmga1P17095 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Hmga1P17095 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmga1P17095 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmga1P17095 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmga1P17095 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmga1P17095 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Hmga1P17095 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmga1P17095 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmga1P17095 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hmga1P17095 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Hmga1P17095 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms