Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col1a1P11087 Gm44008-201ENSMUST00000204345 412 ntBASIC13.5□□□□□ -0.25
Col1a1P11087 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC13.5□□□□□ -0.25
Col1a1P11087 Gm6331-201ENSMUST00000217890 450 ntBASIC13.5□□□□□ -0.25
Col1a1P11087 AC122891.1-201ENSMUST00000218671 268 ntBASIC13.5□□□□□ -0.25
Col1a1P11087 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Col1a1P11087 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col1a1P11087 CT030135.2-201ENSMUST00000225255 893 ntBASIC13.5□□□□□ -0.25
Col1a1P11087 AC138716.2-201ENSMUST00000226670 1016 ntBASIC13.5□□□□□ -0.25
Col1a1P11087 AC137871.1-201ENSMUST00000228278 475 ntBASIC13.5□□□□□ -0.25
Col1a1P11087 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col1a1P11087 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col1a1P11087 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col1a1P11087 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Col1a1P11087 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Col1a1P11087 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col1a1P11087 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col1a1P11087 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col1a1P11087 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Col1a1P11087 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col1a1P11087 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col1a1P11087 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col1a1P11087 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col1a1P11087 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Col1a1P11087 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 Mir181d-201ENSMUST00000102383 72 ntBASIC13.49□□□□□ -0.25
Col1a1P11087 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Col1a1P11087 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 Gm13094-201ENSMUST00000117930 409 ntBASIC13.49□□□□□ -0.25
Col1a1P11087 Gm12129-201ENSMUST00000120104 1147 ntBASIC13.49□□□□□ -0.25
Col1a1P11087 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC13.49□□□□□ -0.25
Col1a1P11087 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC13.49□□□□□ -0.25
Col1a1P11087 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 Gm5529-201ENSMUST00000165691 891 ntBASIC13.49□□□□□ -0.25
Col1a1P11087 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 Gm7627-201ENSMUST00000183205 999 ntBASIC13.49□□□□□ -0.25
Col1a1P11087 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 Gm42511-201ENSMUST00000196160 234 ntBASIC13.49□□□□□ -0.25
Col1a1P11087 Gm43506-201ENSMUST00000200675 753 ntBASIC13.49□□□□□ -0.25
Col1a1P11087 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC13.49□□□□□ -0.25
Col1a1P11087 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC13.49□□□□□ -0.25
Col1a1P11087 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Col1a1P11087 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Col1a1P11087 Gm44913-201ENSMUST00000208060 2990 ntBASIC13.49□□□□□ -0.25
Col1a1P11087 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.49□□□□□ -0.25
Col1a1P11087 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Col1a1P11087 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col1a1P11087 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col1a1P11087 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col1a1P11087 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Col1a1P11087 Gm25343-201ENSMUST00000157460 107 ntBASIC13.48□□□□□ -0.25
Col1a1P11087 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC13.48□□□□□ -0.25
Col1a1P11087 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Col1a1P11087 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Col1a1P11087 Gm9625-201ENSMUST00000180422 955 ntBASIC13.48□□□□□ -0.25
Col1a1P11087 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col1a1P11087 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC13.48□□□□□ -0.25
Col1a1P11087 CT010480.2-201ENSMUST00000225424 737 ntBASIC13.48□□□□□ -0.25
Col1a1P11087 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col1a1P11087 Mir326-201ENSMUST00000083637 95 ntBASIC13.48□□□□□ -0.25
Col1a1P11087 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col1a1P11087 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col1a1P11087 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col1a1P11087 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col1a1P11087 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col1a1P11087 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.48□□□□□ -0.25
Col1a1P11087 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col1a1P11087 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Col1a1P11087 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col1a1P11087 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col1a1P11087 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.48□□□□□ -0.25
Col1a1P11087 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.48□□□□□ -0.25
Col1a1P11087 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col1a1P11087 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col1a1P11087 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col1a1P11087 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col1a1P11087 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC13.48□□□□□ -0.25
Col1a1P11087 Gm14398-201ENSMUST00000117287 1073 ntBASIC13.48□□□□□ -0.25
Col1a1P11087 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms