Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm18706-201ENSMUST00000210053 1066 ntBASIC10.27□□□□□ -0.77
Ccl3P10855 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl3P10855 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Ccl3P10855 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl3P10855 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl3P10855 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC10.27□□□□□ -0.77
Ccl3P10855 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl3P10855 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.27□□□□□ -0.77
Ccl3P10855 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl3P10855 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl3P10855 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.77
Ccl3P10855 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl3P10855 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl3P10855 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl3P10855 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Ccl3P10855 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Ccl3P10855 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl3P10855 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.27□□□□□ -0.77
Ccl3P10855 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl3P10855 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl3P10855 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl3P10855 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Ccl3P10855 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl3P10855 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl3P10855 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl3P10855 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl3P10855 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Ccl3P10855 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Ccl3P10855 Gm45546-201ENSMUST00000211053 2394 ntBASIC10.26□□□□□ -0.77
Ccl3P10855 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl3P10855 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Ccl3P10855 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl3P10855 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl3P10855 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl3P10855 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Ccl3P10855 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl3P10855 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.26□□□□□ -0.77
Ccl3P10855 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl3P10855 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl3P10855 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.26□□□□□ -0.77
Ccl3P10855 Gm14071-201ENSMUST00000117817 509 ntBASIC10.26□□□□□ -0.77
Ccl3P10855 Gm11500-201ENSMUST00000118237 601 ntBASIC10.26□□□□□ -0.77
Ccl3P10855 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl3P10855 Gm8451-201ENSMUST00000170338 447 ntBASIC10.26□□□□□ -0.77
Ccl3P10855 Mir6923-201ENSMUST00000184592 72 ntBASIC10.26□□□□□ -0.77
Ccl3P10855 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Ccl3P10855 Gm7902-201ENSMUST00000198842 947 ntBASIC10.26□□□□□ -0.77
Ccl3P10855 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl3P10855 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl3P10855 Mt1-202ENSMUST00000211807 1085 ntBASIC10.26□□□□□ -0.77
Ccl3P10855 Gm6390-201ENSMUST00000215034 589 ntBASIC10.26□□□□□ -0.77
Ccl3P10855 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC10.26□□□□□ -0.77
Ccl3P10855 Gm7536-201ENSMUST00000077389 444 ntBASIC10.26□□□□□ -0.77
Ccl3P10855 Gm5453-201ENSMUST00000080866 447 ntBASIC10.26□□□□□ -0.77
Ccl3P10855 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl3P10855 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl3P10855 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl3P10855 Gm43364-201ENSMUST00000196046 3274 ntBASIC10.26□□□□□ -0.77
Ccl3P10855 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl3P10855 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl3P10855 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.26□□□□□ -0.77
Ccl3P10855 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
Ccl3P10855 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl3P10855 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl3P10855 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl3P10855 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl3P10855 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.26□□□□□ -0.77
Ccl3P10855 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl3P10855 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl3P10855 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl3P10855 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Ccl3P10855 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl3P10855 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl3P10855 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.25□□□□□ -0.77
Ccl3P10855 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Ccl3P10855 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl3P10855 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl3P10855 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl3P10855 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl3P10855 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl3P10855 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl3P10855 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl3P10855 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl3P10855 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.25□□□□□ -0.77
Ccl3P10855 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl3P10855 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl3P10855 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC10.25□□□□□ -0.77
Ccl3P10855 Gm8111-201ENSMUST00000117659 987 ntBASIC10.25□□□□□ -0.77
Ccl3P10855 Gm11700-201ENSMUST00000119409 403 ntBASIC10.25□□□□□ -0.77
Ccl3P10855 Gm15197-201ENSMUST00000120526 478 ntBASIC10.25□□□□□ -0.77
Ccl3P10855 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl3P10855 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC10.25□□□□□ -0.77
Ccl3P10855 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl3P10855 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl3P10855 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC10.25□□□□□ -0.77
Ccl3P10855 Gm44552-201ENSMUST00000205458 1247 ntBASIC10.25□□□□□ -0.77
Ccl3P10855 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
Ccl3P10855 Gm18065-201ENSMUST00000221395 526 ntBASIC10.25□□□□□ -0.77
Ccl3P10855 AC140375.1-201ENSMUST00000225421 694 ntBASIC10.25□□□□□ -0.77
Ccl3P10855 AC130477.1-201ENSMUST00000226982 420 ntBASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms