Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc6P10629 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc6P10629 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.9□□□□□ -0.34
Hoxc6P10629 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.9□□□□□ -0.34
Hoxc6P10629 Gm22846-201ENSMUST00000157706 270 ntBASIC12.9□□□□□ -0.34
Hoxc6P10629 Gm24809-201ENSMUST00000175318 271 ntBASIC12.9□□□□□ -0.34
Hoxc6P10629 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.9□□□□□ -0.34
Hoxc6P10629 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.9□□□□□ -0.34
Hoxc6P10629 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc6P10629 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Hoxc6P10629 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc6P10629 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc6P10629 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc6P10629 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc6P10629 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Hoxc6P10629 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc6P10629 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc6P10629 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc6P10629 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc6P10629 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.35
Hoxc6P10629 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Hoxc6P10629 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Hoxc6P10629 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Hoxc6P10629 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.9□□□□□ -0.35
Hoxc6P10629 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc6P10629 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.89□□□□□ -0.35
Hoxc6P10629 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Hoxc6P10629 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Hoxc6P10629 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc6P10629 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc6P10629 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Hoxc6P10629 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.89□□□□□ -0.35
Hoxc6P10629 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Hoxc6P10629 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc6P10629 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC12.89□□□□□ -0.35
Hoxc6P10629 Gm14993-201ENSMUST00000121180 164 ntBASIC12.89□□□□□ -0.35
Hoxc6P10629 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc6P10629 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC12.89□□□□□ -0.35
Hoxc6P10629 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.89□□□□□ -0.35
Hoxc6P10629 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc6P10629 Gm20495-201ENSMUST00000173902 235 ntBASIC12.89□□□□□ -0.35
Hoxc6P10629 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc6P10629 Gm7719-201ENSMUST00000182374 975 ntBASIC12.89□□□□□ -0.35
Hoxc6P10629 Gm37284-201ENSMUST00000193607 539 ntBASIC12.89□□□□□ -0.35
Hoxc6P10629 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Hoxc6P10629 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC12.89□□□□□ -0.35
Hoxc6P10629 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc6P10629 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.89□□□□□ -0.35
Hoxc6P10629 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Hoxc6P10629 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc6P10629 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.89□□□□□ -0.35
Hoxc6P10629 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC12.89□□□□□ -0.35
Hoxc6P10629 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc6P10629 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc6P10629 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.89□□□□□ -0.35
Hoxc6P10629 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.89□□□□□ -0.35
Hoxc6P10629 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc6P10629 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc6P10629 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc6P10629 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Hoxc6P10629 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Hoxc6P10629 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc6P10629 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc6P10629 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.88□□□□□ -0.35
Hoxc6P10629 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC12.88□□□□□ -0.35
Hoxc6P10629 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Hoxc6P10629 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc6P10629 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc6P10629 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Hoxc6P10629 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc6P10629 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.88□□□□□ -0.35
Hoxc6P10629 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.88□□□□□ -0.35
Hoxc6P10629 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc6P10629 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc6P10629 Gm12179-201ENSMUST00000118344 1272 ntBASIC12.88□□□□□ -0.35
Hoxc6P10629 Gm11578-201ENSMUST00000118530 459 ntBASIC12.88□□□□□ -0.35
Hoxc6P10629 Mir1905-201ENSMUST00000122779 82 ntBASIC12.88□□□□□ -0.35
Hoxc6P10629 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc6P10629 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.88□□□□□ -0.35
Hoxc6P10629 Gm16030-201ENSMUST00000159098 603 ntBASIC12.88□□□□□ -0.35
Hoxc6P10629 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.88□□□□□ -0.35
Hoxc6P10629 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.88□□□□□ -0.35
Hoxc6P10629 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc6P10629 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.88□□□□□ -0.35
Hoxc6P10629 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Hoxc6P10629 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc6P10629 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC12.88□□□□□ -0.35
Hoxc6P10629 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc6P10629 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc6P10629 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc6P10629 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.88□□□□□ -0.35
Hoxc6P10629 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc6P10629 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.88□□□□□ -0.35
Hoxc6P10629 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc6P10629 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc6P10629 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.88□□□□□ -0.35
Hoxc6P10629 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc6P10629 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc6P10629 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxc6P10629 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms