Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
ApoeP08226 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
ApoeP08226 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.01□□□□□ -0.65
ApoeP08226 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.01□□□□□ -0.65
ApoeP08226 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
ApoeP08226 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
ApoeP08226 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.01□□□□□ -0.65
ApoeP08226 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.01□□□□□ -0.65
ApoeP08226 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.01□□□□□ -0.65
ApoeP08226 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.01□□□□□ -0.65
ApoeP08226 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.01□□□□□ -0.65
ApoeP08226 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.01□□□□□ -0.65
ApoeP08226 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.01□□□□□ -0.65
ApoeP08226 Gm43966-201ENSMUST00000203301 612 ntBASIC11.01□□□□□ -0.65
ApoeP08226 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.01□□□□□ -0.65
ApoeP08226 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Gm18065-201ENSMUST00000221395 526 ntBASIC11.01□□□□□ -0.65
ApoeP08226 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.01□□□□□ -0.65
ApoeP08226 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.01□□□□□ -0.65
ApoeP08226 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
ApoeP08226 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.01□□□□□ -0.65
ApoeP08226 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
ApoeP08226 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
ApoeP08226 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.01□□□□□ -0.65
ApoeP08226 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ApoeP08226 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
ApoeP08226 Gm37954-201ENSMUST00000195400 2071 ntBASIC11□□□□□ -0.65
ApoeP08226 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11□□□□□ -0.65
ApoeP08226 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Gm43127-201ENSMUST00000195890 2789 ntBASIC11□□□□□ -0.65
ApoeP08226 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11□□□□□ -0.65
ApoeP08226 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
ApoeP08226 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11□□□□□ -0.65
ApoeP08226 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11□□□□□ -0.65
ApoeP08226 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11□□□□□ -0.65
ApoeP08226 Gm11658-201ENSMUST00000120913 1008 ntBASIC11□□□□□ -0.65
ApoeP08226 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Gm9034-201ENSMUST00000182071 1005 ntBASIC11□□□□□ -0.65
ApoeP08226 Gm2467-201ENSMUST00000182266 1010 ntBASIC11□□□□□ -0.65
ApoeP08226 Gm6981-201ENSMUST00000182467 1008 ntBASIC11□□□□□ -0.65
ApoeP08226 Gm9794-201ENSMUST00000202370 423 ntBASIC11□□□□□ -0.65
ApoeP08226 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11□□□□□ -0.65
ApoeP08226 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11□□□□□ -0.65
ApoeP08226 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11□□□□□ -0.65
ApoeP08226 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11□□□□□ -0.65
ApoeP08226 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ApoeP08226 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11□□□□□ -0.65
ApoeP08226 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms