Protein–RNA interactions for Protein: P07309

Ttr, Transthyretin, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TtrP07309 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC8.41□□□□□ -1.06
TtrP07309 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
TtrP07309 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Gm7642-201ENSMUST00000216345 1809 ntBASIC8.41□□□□□ -1.06
TtrP07309 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
TtrP07309 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
TtrP07309 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
TtrP07309 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
TtrP07309 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Gm8706-201ENSMUST00000197372 1491 ntBASIC8.41□□□□□ -1.06
TtrP07309 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
TtrP07309 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
TtrP07309 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
TtrP07309 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC8.41□□□□□ -1.06
TtrP07309 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC8.41□□□□□ -1.06
TtrP07309 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
TtrP07309 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC8.41□□□□□ -1.06
TtrP07309 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC8.41□□□□□ -1.06
TtrP07309 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC8.41□□□□□ -1.06
TtrP07309 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC8.41□□□□□ -1.06
TtrP07309 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Gm9996-201ENSMUST00000070359 913 ntBASIC8.41□□□□□ -1.06
TtrP07309 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
TtrP07309 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
TtrP07309 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
TtrP07309 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC8.41□□□□□ -1.06
TtrP07309 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC8.41□□□□□ -1.06
TtrP07309 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 AC169511.2-201ENSMUST00000226674 2063 ntBASIC8.41□□□□□ -1.06
TtrP07309 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TtrP07309 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
TtrP07309 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TtrP07309 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TtrP07309 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
TtrP07309 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC8.4□□□□□ -1.06
TtrP07309 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TtrP07309 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TtrP07309 Zscan30-202ENSMUST00000224144 1458 ntBASIC8.4□□□□□ -1.06
TtrP07309 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
TtrP07309 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TtrP07309 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
TtrP07309 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TtrP07309 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TtrP07309 AC159195.3-201ENSMUST00000225162 2211 ntBASIC8.4□□□□□ -1.06
TtrP07309 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TtrP07309 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TtrP07309 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TtrP07309 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
TtrP07309 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC8.4□□□□□ -1.06
TtrP07309 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC8.4□□□□□ -1.06
TtrP07309 Gm16177-201ENSMUST00000120728 718 ntBASIC8.4□□□□□ -1.06
TtrP07309 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC8.4□□□□□ -1.06
TtrP07309 Gm2639-201ENSMUST00000156881 1297 ntBASIC8.4□□□□□ -1.06
TtrP07309 Gm24548-201ENSMUST00000158650 108 ntBASIC8.4□□□□□ -1.06
TtrP07309 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
TtrP07309 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC8.4□□□□□ -1.06
TtrP07309 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TtrP07309 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC8.4□□□□□ -1.06
TtrP07309 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
TtrP07309 Gm5035-201ENSMUST00000215581 927 ntBASIC8.4□□□□□ -1.06
TtrP07309 AC166095.1-201ENSMUST00000223731 1241 ntBASIC8.4□□□□□ -1.06
TtrP07309 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TtrP07309 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TtrP07309 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TtrP07309 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TtrP07309 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
TtrP07309 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC8.4□□□□□ -1.06
TtrP07309 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TtrP07309 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC8.4□□□□□ -1.06
TtrP07309 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
TtrP07309 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
TtrP07309 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms