Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
TnfP06804 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TnfP06804 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.35□□□□□ -0.43
TnfP06804 Gm23105-201ENSMUST00000083719 134 ntBASIC12.35□□□□□ -0.43
TnfP06804 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TnfP06804 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TnfP06804 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TnfP06804 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.35□□□□□ -0.43
TnfP06804 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TnfP06804 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.35□□□□□ -0.43
TnfP06804 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
TnfP06804 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TnfP06804 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
TnfP06804 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.35□□□□□ -0.43
TnfP06804 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TnfP06804 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.35□□□□□ -0.43
TnfP06804 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TnfP06804 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TnfP06804 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TnfP06804 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TnfP06804 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.34□□□□□ -0.43
TnfP06804 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TnfP06804 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TnfP06804 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TnfP06804 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TnfP06804 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TnfP06804 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
TnfP06804 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TnfP06804 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TnfP06804 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TnfP06804 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
TnfP06804 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TnfP06804 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TnfP06804 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TnfP06804 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.34□□□□□ -0.43
TnfP06804 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TnfP06804 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TnfP06804 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.34□□□□□ -0.43
TnfP06804 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TnfP06804 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.34□□□□□ -0.43
TnfP06804 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.34□□□□□ -0.43
TnfP06804 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TnfP06804 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TnfP06804 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TnfP06804 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TnfP06804 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TnfP06804 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TnfP06804 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
TnfP06804 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
TnfP06804 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TnfP06804 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TnfP06804 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TnfP06804 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.34□□□□□ -0.43
TnfP06804 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TnfP06804 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TnfP06804 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.34□□□□□ -0.43
TnfP06804 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TnfP06804 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TnfP06804 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
TnfP06804 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TnfP06804 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TnfP06804 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.33□□□□□ -0.44
TnfP06804 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TnfP06804 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TnfP06804 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.33□□□□□ -0.44
TnfP06804 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TnfP06804 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TnfP06804 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TnfP06804 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.33□□□□□ -0.44
TnfP06804 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TnfP06804 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TnfP06804 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TnfP06804 Gm15329-201ENSMUST00000121408 155 ntBASIC12.33□□□□□ -0.44
TnfP06804 Gm15549-201ENSMUST00000121595 622 ntBASIC12.33□□□□□ -0.44
TnfP06804 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.33□□□□□ -0.44
TnfP06804 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.33□□□□□ -0.44
TnfP06804 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TnfP06804 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.33□□□□□ -0.44
TnfP06804 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TnfP06804 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
TnfP06804 Gm9358-201ENSMUST00000183067 927 ntBASIC12.33□□□□□ -0.44
TnfP06804 Gm17877-201ENSMUST00000192578 814 ntBASIC12.33□□□□□ -0.44
TnfP06804 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TnfP06804 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.33□□□□□ -0.44
TnfP06804 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.33□□□□□ -0.44
TnfP06804 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
TnfP06804 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TnfP06804 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
TnfP06804 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TnfP06804 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TnfP06804 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TnfP06804 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TnfP06804 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TnfP06804 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TnfP06804 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TnfP06804 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TnfP06804 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TnfP06804 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.32□□□□□ -0.44
TnfP06804 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
TnfP06804 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms