Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa4P06798 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Hoxa4P06798 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Hoxa4P06798 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.47□□□□□ -0.57
Hoxa4P06798 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Hoxa4P06798 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.47□□□□□ -0.57
Hoxa4P06798 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Hoxa4P06798 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.47□□□□□ -0.57
Hoxa4P06798 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.47□□□□□ -0.57
Hoxa4P06798 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.47□□□□□ -0.57
Hoxa4P06798 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.47□□□□□ -0.57
Hoxa4P06798 Gm12247-201ENSMUST00000117585 670 ntBASIC11.47□□□□□ -0.57
Hoxa4P06798 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.47□□□□□ -0.57
Hoxa4P06798 Gm4726-201ENSMUST00000135604 736 ntBASIC11.47□□□□□ -0.57
Hoxa4P06798 Gm10051-201ENSMUST00000145209 414 ntBASIC11.47□□□□□ -0.57
Hoxa4P06798 Gm6019-201ENSMUST00000148369 736 ntBASIC11.47□□□□□ -0.57
Hoxa4P06798 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.47□□□□□ -0.57
Hoxa4P06798 Gm4654-201ENSMUST00000183305 982 ntBASIC11.47□□□□□ -0.57
Hoxa4P06798 Mir6546-201ENSMUST00000184460 62 ntBASIC11.47□□□□□ -0.57
Hoxa4P06798 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.47□□□□□ -0.57
Hoxa4P06798 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.47□□□□□ -0.57
Hoxa4P06798 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 Gm42997-202ENSMUST00000200321 985 ntBASIC11.47□□□□□ -0.57
Hoxa4P06798 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Hoxa4P06798 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.47□□□□□ -0.57
Hoxa4P06798 Gm43916-201ENSMUST00000205062 967 ntBASIC11.47□□□□□ -0.57
Hoxa4P06798 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.47□□□□□ -0.57
Hoxa4P06798 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.47□□□□□ -0.57
Hoxa4P06798 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.47□□□□□ -0.57
Hoxa4P06798 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Hoxa4P06798 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.47□□□□□ -0.57
Hoxa4P06798 Gm8420-201ENSMUST00000097103 598 ntBASIC11.47□□□□□ -0.57
Hoxa4P06798 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Hoxa4P06798 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Hoxa4P06798 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.47□□□□□ -0.57
Hoxa4P06798 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa4P06798 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.47□□□□□ -0.57
Hoxa4P06798 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa4P06798 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa4P06798 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.46□□□□□ -0.57
Hoxa4P06798 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa4P06798 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Hoxa4P06798 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa4P06798 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa4P06798 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa4P06798 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa4P06798 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa4P06798 Gm12419-201ENSMUST00000116649 636 ntBASIC11.46□□□□□ -0.57
Hoxa4P06798 Gm14585-201ENSMUST00000120713 634 ntBASIC11.46□□□□□ -0.57
Hoxa4P06798 Gm9089-201ENSMUST00000122027 526 ntBASIC11.46□□□□□ -0.57
Hoxa4P06798 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa4P06798 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.46□□□□□ -0.57
Hoxa4P06798 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa4P06798 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.46□□□□□ -0.57
Hoxa4P06798 Gm7741-201ENSMUST00000181445 989 ntBASIC11.46□□□□□ -0.57
Hoxa4P06798 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.46□□□□□ -0.57
Hoxa4P06798 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.57
Hoxa4P06798 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa4P06798 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa4P06798 Gm8574-201ENSMUST00000203207 924 ntBASIC11.46□□□□□ -0.57
Hoxa4P06798 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa4P06798 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa4P06798 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa4P06798 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.46□□□□□ -0.57
Hoxa4P06798 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.46□□□□□ -0.57
Hoxa4P06798 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.46□□□□□ -0.57
Hoxa4P06798 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.46□□□□□ -0.57
Hoxa4P06798 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.46□□□□□ -0.57
Hoxa4P06798 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa4P06798 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Hoxa4P06798 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa4P06798 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.46□□□□□ -0.57
Hoxa4P06798 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa4P06798 Gm5451-201ENSMUST00000080545 579 ntBASIC11.46□□□□□ -0.57
Hoxa4P06798 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Hoxa4P06798 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms